AMCG00021214


Basic Information

Item Value
gene id AMCG00021214
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 9377192 ~ 9387360 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021214
GTTTGGTTTCCTCTCTTATCTCACTCGGGCTGCTGCAGTTTCACCCGGGGACGCGGAAACAAGCTGCTCTCACATCAGATACCGAGCAGTTCCTCACACGGATCAATATATCGCCTGTATTTTGCCGATATCGGCCGTGAACCCCGCTTCGTGCCAGCGCGGTGCCGTGCCCTCAGGATGCGCCCCGCTCTCCTGCTGCTGTGCGCCGCCGCGACCGCGCTAGGGTCGGCTGACAACAGGACGGgcAAACTCCCTCCACCAACTAATTTAACCATTGTGTTGAAAAATGACTGCTGTGTGCAGTTAAAATGGAGTCCCCCTGATGGCTTGGACACAAACACCTGTAAGGTCAAGTATGTCGTGGAAGGCAAACAGCGTTACAGATCATTCTACACCTCTTATGAAGAATGTTTTGATATAACTGATCATCTAGCATCAGTGAAAGACTTTGAGTGCTTCATGTATGAGAAGGAACACATAAACTGCACCTGGCTTCCGGAGAACAACCAAATCATCAGCCTGCTTCGGGTACTGATTCTGCCTGACATCCCTGATCCCAGCGCCATCTTCAAAGTGGTCGCCAAAAGTGATGGTCGGTTTATGCCAATGCCTTTTCAGACATGgGCTACGAGTAAGGAAAAGGAATATGATTTGTTTGAACCCAAAGATGAAGATGTGTCTCAGTTGGTGGTGGAACAGGTGCCCGAGTGTGCGCAGGATAAATAACGCACGAGACCCCAGGAACAGCACACGTCAACTTTTCATGTGTGACATCTTGTAACTCAGAATCATGTCATTTTCTCAGGGAGACTCTGCTACATAGGAAACGAGTCAAACATTGGGATCAGGTATTTCCAACAGAACTCCAGTCTGACTACAGATTTCATAAATTAATTGGACCCTTTCCTCCCTGGAAATctaggaaaaaataagagagagGATCTCCTGAAGACTGCTCTTAGGATCAAAATGTCAATGCCTTCTTGTATACAtctaacatttttaattgacgTAGAAAACACTCCTGTCTGGTTCCTGAGAGCTCGGCCAGGATAGTGAAAGTAAAAAGGACAATTAAACATTCAGGCGTTGCCTTTTGTTAAATGGTGTGCTAAATTGACCTCCACAATCAAACAGATTATCTTACAGCACAACTGCAGCTTGTATGCTATGTCAAAGGAAGtttattaattgtgtttattaatatgttGTCAATTATGTTACAGACAATGTATGACCTTTGAAAACATTCAGCATATTGCTCAGGTTTCACAAAGTAGGTATTCATTTGCGGTAAATTGAGCGACAGAACAGTGTATAAGCTTTTGGAAGTGTGCTGCAACAGTTTTATATAGCAGTATCTTATTCAACAGGTGCCATAATTTATAAGGCTAGCCCAAGTTTTGTACATAGTAGGTATGAATGGCATATTGTCATTTTGATCATATCAAAAAGGACTTTATGACTGAATTTTTAGGCAGACAATTTTCAGAAGATGTATGCAAATATATCTTTGGCATTCATTTGCACAAATTTTCATTTGGCATGAAAATCAAGATCAATAAAATGACTGGGAACAGCACTTTTCCAATAACGCACAGACTCCCCTTAAACACTAATGCAATCAATTTTTCaacataatttgtgaaaatatcataataataagctACTGAATACATGAACTAATAATtcatacaattttgttttaagaatgcTACTCTCAAACTGTGAGAAAGCTCTGTTGGGAATAGGGATTCATATCTCCCTAAAAATGGTTGTAAATGAAAAGAAGGAAGATCATGCAAATCTTTCAAACTGTAAAACACGGGTTTTGTCAGCTTCATTCCCATTCTCCTTCATCAGAGGTTAGTGCCGTTTCTCTTGGTGCATCGTTGGCGGCTTAGTGTAATGATAAACATCCTTATCCCTACCAGAATGAGTTTAATTTCctgttaaatttaaatgtatttacacaacGAAGGTTGAGCAGTTCTACGCTAGTACTTTCCAGGAAGCggaccttttttcttttttcttttttgtttaatgatagATTTATAAGGGAGTGTAACTGTAAAAATGTTAGtgacaaatgtattgtaaaataaatgcagttttttcAAGTGTTGTGCTATatgagaaaacaatgttttgtatatattcatttaataaaCAACTGTTCACTAtctgtttaaaaagcaaaataacaaaagtaaagatgttttatatattatatataatttatagttTTAACATACCTGTATATAAAGCACATTAATATAATACTTAACAGAATAATCACTTGTTGTAAATTTCTATATACAGACAGCTATAAATATGgtgtgttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021214 True 2348 mRNA 0.39 6 9377192 9387360

Neighbor

gene id symbol gene type direction distance location
AMCG00021213 stk26 coding downstream 9539 9341453 ~ 9367653 (-)
AMCG00021210 dach2 coding downstream 142993 9233425 ~ 9234199 (-)
AMCG00021207 dach2 coding downstream 254763 9084763 ~ 9122429 (-)
AMCG00021206 dach2,LOC107581921 coding downstream 302806 9068018 ~ 9074386 (-)
AMCG00021205 NA coding downstream 377588 8982496 ~ 8999604 (-)
AMCG00021215 dock11 coding upstream 3167 9390527 ~ 9455880 (-)
AMCG00021216 LOC104946895,LOC104946900,LOC104948975 coding upstream 96058 9483418 ~ 9514021 (-)
AMCG00021223 NA coding upstream 446158 9833518 ~ 9834063 (-)
AMCG00021222 NA coding upstream 461600 9848960 ~ 9860715 (-)
AMCG00021221 LOC103024645,LOC108440084,LOC106603334,LOC107663112,LOC107568996,LOC105026974 coding upstream 477331 9864691 ~ 9879985 (-)
G84332 hmgb3a,LOC106563671,LOC107750581,LOC107678073,LOC107561946 non-coding downstream 536533 8836275 ~ 8840659 (-)
G84311 NA non-coding downstream 635779 8741161 ~ 8741413 (-)
G84307 NA non-coding downstream 675274 8701579 ~ 8701918 (-)
G84305 NA non-coding downstream 786704 8589220 ~ 8590488 (-)
G84304 NA non-coding downstream 788139 8587569 ~ 8589053 (-)
G84514 NA non-coding upstream 700344 10087704 ~ 10090475 (-)
G84603 NA non-coding upstream 1025815 10413175 ~ 10414481 (-)
G84614 NA non-coding upstream 1087057 10474417 ~ 10477459 (-)
G84651 NA non-coding upstream 1455372 10842732 ~ 10843021 (-)
G84667 NA non-coding upstream 1763626 11150986 ~ 11151438 (-)
AMCG00021153 NA other downstream 2254701 7115420 ~ 7122491 (-)
G83864 NA other downstream 2830615 6544492 ~ 6546577 (-)
G83761 NA other downstream 4625957 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 6658273 2677585 ~ 2718919 (-)
G83428 NA other downstream 6917813 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 2706117 12093477 ~ 12100854 (-)
G84814 NA other upstream 3139733 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 3332504 12719864 ~ 12801586 (-)
G84952 NA other upstream 4239975 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 4482579 13869939 ~ 13917868 (-)

Expression


Co-expression Network