AMCG00021217


Basic Information

Item Value
gene id AMCG00021217
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 9626560 ~ 9629641 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021217
CTACAGTGGAGTGCTACAACCCCAGAACCAATGAGTGGACATACGTGGCAAAAATGAATGAACCTCATTACGGACATGCTGGCACAGTTTACGGAGGCTTTATGTACATTTCAGgtgGAATCACCCATGACACTTTCCAAAAAGAGCTCATGTGCTTCGACCCCGACACAGACAAATGGAGTCAGAAAGCGCCCATGACCACAGTGAGAGGCCTGCACTGTATGTGTACTGTTGGCGACAGGCTGTACGTTATTGGGGGGAACCACTTTCGAGGCACGAGCGATTATGACGATGTTCTGAGCTGTGAGTATTACTCTCCAGCCCTGGACCAGTGGACTCCAATTGCAGCCATGCTCCGAGGGCAGAGCGATGTGGGGGTGGCggtgtttgaaaacaaaatctacgTCGTGGGCGGCTACTCGTGGAACAACCGCTGCATGGTGGAAATAGTTCAAAAGTATGATCCCGAGAAGGATGAGTGGCATAAAGTTTTTGACCTTCCTGAATCTCTTGGAGGAATCAGAGCTTGTACTCTCACTGTCTTTCCCCCTGAGGACAATACTGGATCACCTTCTAGGGAGTCTCCTCTTTCTGCACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021217 True 599 mRNA 0.50 2 9626560 9629641

Neighbor

gene id symbol gene type direction distance location
AMCG00021218 klhl13 coding upstream 13426 9603592 ~ 9613134 (+)
AMCG00021212 NA coding upstream 286868 9324264 ~ 9339692 (+)
AMCG00021211 NA coding upstream 314855 9268977 ~ 9311705 (+)
AMCG00021197 cnpy3 coding upstream 615374 9004899 ~ 9011186 (+)
AMCG00021198 LOC107665932 coding upstream 651952 8953948 ~ 8974608 (+)
AMCG00021219 NA coding downstream 84896 9714537 ~ 9829743 (+)
AMCG00021226 lrch2 coding downstream 317519 9947160 ~ 9947483 (+)
AMCG00021225 lrch2 coding downstream 345402 9975043 ~ 10004002 (+)
AMCG00021224 NA coding downstream 386879 10016520 ~ 10029583 (+)
AMCG00021229 NA coding downstream 414540 10044181 ~ 10044720 (+)
G84298 NA non-coding upstream 1037597 8587598 ~ 8588963 (+)
G84276 NA non-coding upstream 1068142 8555961 ~ 8558418 (+)
G84244 NA non-coding upstream 1250522 8375331 ~ 8376038 (+)
G84196 NA non-coding upstream 1419182 8201838 ~ 8207378 (+)
G84155 NA non-coding upstream 1646734 7978217 ~ 7979826 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding downstream 235045 9864686 ~ 9878867 (+)
G84495 NA non-coding downstream 376470 10006111 ~ 10009690 (+)
G84535 NA non-coding downstream 595442 10225083 ~ 10225298 (+)
G84536 NA non-coding downstream 598264 10227905 ~ 10262453 (+)
G84549 NA non-coding downstream 650347 10279988 ~ 10361508 (+)
G84425 NA other upstream 203141 9416267 ~ 9423419 (+)
G84301 NA other upstream 993150 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 1583261 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 2505323 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 3079959 6544234 ~ 6546601 (+)
AMCG00021240 LOC107742636 other downstream 840422 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 1333507 10963148 ~ 10987174 (+)
G84749 NA other downstream 2445704 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 3805666 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 4386492 14016133 ~ 14033557 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000039_07673393_07690390 KLHL13 coding CI01000039 null 7673393 ~ 7691259 (+)