AMCG00021223


Basic Information

Item Value
gene id AMCG00021223
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 9833518 ~ 9834063 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021223
ATGCATTACCCAGATGAGAATAATGCTATGTGGGCGGCAGCAATGGCTTTGATGAAGAACACCCTGGGATTTTTGATCCCATTCACGATAATAGCCACCTGTTACATTGGCATCGGGAAACACTTGCTTAGAACCCCCGACTTGGACAAAAGCACCAACAACAGAGACAGGGCCCTGAAGATGGTGATAGCAGTGGTTTTGGCCTTCTTCCTTTGCTGGTTTCCATTCCATGTCGTCACATTTTTGGATGTGCTGACCAGATTCAAACTGATCACCAGTTGCGAGGTGAAGTCGTTCATTGACACCGTGATGCCTTTCACGCTGTGTGTCGCCTTCATGAACAGCTCCATTAACCCATTCCTCTACTCCTTCCTTGGCAACCATTTCAGAGAACAGTTCCACCACCTATATGACAGGAGGCAATCCAGCCTGTCCCAAAAGAGGGGCTCCATCAGTACCAGACTCAGTTCCTTCTCAAGGAAACTCAGTGACCTCAAGGACATGGGAGTGCTTGAAACATTCACACAGAGTAAGGGACATGAGTGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04167 AGTR2; angiotensin II receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021223 True 546 mRNA 0.48 1 9833518 9834063

Neighbor

gene id symbol gene type direction distance location
AMCG00021216 LOC104946895,LOC104946900,LOC104948975 coding downstream 319497 9483418 ~ 9514021 (-)
AMCG00021215 dock11 coding downstream 377638 9390527 ~ 9455880 (-)
AMCG00021214 NA coding downstream 446158 9377192 ~ 9387360 (-)
AMCG00021213 stk26 coding downstream 465865 9341453 ~ 9367653 (-)
AMCG00021210 dach2 coding downstream 599319 9233425 ~ 9234199 (-)
AMCG00021222 NA coding upstream 14897 9848960 ~ 9860715 (-)
AMCG00021221 LOC103024645,LOC108440084,LOC106603334,LOC107663112,LOC107568996,LOC105026974 coding upstream 30628 9864691 ~ 9879985 (-)
AMCG00021220 NA coding upstream 103541 9937604 ~ 9945176 (-)
AMCG00021228 NA coding upstream 260417 10094480 ~ 10104407 (-)
AMCG00021231 NA coding upstream 292492 10126555 ~ 10147869 (-)
G84332 hmgb3a,LOC106563671,LOC107750581,LOC107678073,LOC107561946 non-coding downstream 992859 8836275 ~ 8840659 (-)
G84311 NA non-coding downstream 1092105 8741161 ~ 8741413 (-)
G84307 NA non-coding downstream 1131600 8701579 ~ 8701918 (-)
G84305 NA non-coding downstream 1243030 8589220 ~ 8590488 (-)
G84304 NA non-coding downstream 1244465 8587569 ~ 8589053 (-)
G84514 NA non-coding upstream 253641 10087704 ~ 10090475 (-)
G84603 NA non-coding upstream 579112 10413175 ~ 10414481 (-)
G84614 NA non-coding upstream 640354 10474417 ~ 10477459 (-)
G84651 NA non-coding upstream 1008669 10842732 ~ 10843021 (-)
G84667 NA non-coding upstream 1316923 11150986 ~ 11151438 (-)
AMCG00021153 NA other downstream 2711027 7115420 ~ 7122491 (-)
G83864 NA other downstream 3286941 6544492 ~ 6546577 (-)
G83761 NA other downstream 5082283 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 7114599 2677585 ~ 2718919 (-)
G83428 NA other downstream 7374139 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 2259414 12093477 ~ 12100854 (-)
G84814 NA other upstream 2693030 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 2885801 12719864 ~ 12801586 (-)
G84952 NA other upstream 3793272 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 4035876 13869939 ~ 13917868 (-)

Expression


Co-expression Network