AMCG00021224


Basic Information

Item Value
gene id AMCG00021224
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 10016520 ~ 10029583 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021224
ttcCATGGAATTTCCTTGCTGACTATCATTTATCTGCATTTACTTCTCTGTTCATCAGTCACAAATCACTTCATTCTGTGGTGGCTTCATTCAGACCTGCAGATAATTGACCCTGGTCATCTAGGACAACTTTACGTTAGATGGCATCCCCCAGCTAGCTTGGAAAATAGGAAAGACTGCACAGTGCGATATCAGCTGCAGTATTTCAATACCTATGATGGAGAATGGGAGACTATCAGAACCAGTCACTTAAACTACACTGCGCAATTCAACCTTGGCAAAGAAACAAGAGTTAAAGTTCAGACCCTGTTAAGAGGACAGTGTGTGAATGGAACTGATTTGTTAAGCGTGCCAACTGAGAAAACACTGCTGTCTTCCGAGAATGGGCCAACAGAATCGAAGGTCACAGACTTTGCCTGTATTTTCTATCACCGGGAATATATGGAATGCAATTGGAAGAAGGGAAAAGAAGCACCACCCCACTCGAAATACTCCTTATTTTATTGGCATAAGAAGATGAACCAGGCAATGGAGTGTCCTAAATACATCCAGACCAATGGAGTAAACACAGGATGTAATTTCACCAGTAATAGTTTAATGGAGTTCACTGAATTCAACATATGTGTGAATGGATCTTCAAAGGAGACCCCCCTAAGGCCTACCTATTTTATGCTGCAACTCCAGAATATAgTAAAACCAGCTGCTCTTGAGATTCTGAACATAACTGCCCTTGAAAACGCAAAAATCAGATTGAAATGGACACCTATAAAAGGGAAAATCCCAAACCATTGCTTGGAGTATGAGATTCAACACAGACAAGAAGGCCAAGAATGGATTAGTCAGCAAATTACAGAATCAACATTCATCATTTTCAGTATTGACCAACATGAAAAACACTGCTTTCGAGTGAGAAGCAAGTTGAACATTTACTGTGCGGATAGTAATGTCTGGAGTGACTGGAGCAAGCAACACTGCATTCCTGaTGCAAGGGACCCAAATGACACTTCAGTACAAACTATGGCATTGTGTGTCCTGGCTACCATGATATTGTTCACCCTTACGCTTTTCTTATGGATTAGGAGACAGATttcaAAGGGAAAAGGTGTTAAAGAAGGTATTTTACTTGGAGTTGAATGTGAACAGAAAATGAATTCTCCTTAAATGTCTTCAGATTTCCTTCAGCTGGCTAAaatctctgctctctctctctgcatattCAGTACCATAAGCATACacaggtacagtgccttgcaaaagtattcagacccttcctatggtgtcccattatgtgaaattacaaaatggtgCATACAGATTCAAATCTTGAATGCTCAGACTGATGcaggatcactcaggtgctttgttgcaaactcTATACAGGCTTTGAAACTCACTACCTGActaaggaacctcacagagacggGTGTCtgtattctgaaatcatgagaaccactattactgcacacagacaggggCCATTCAACTCATTGTGTGGTTCATTATGCTCATTGTGTgtacctgaattaatttaggtttgccaTACCAAATGTTTGATTACTAGAGCAGTCATACCTCttcaatttttatttcattttcatgatctatttatgtctttctttttgtatttgctttgaAAGTGTGAAGTGTGGAGTTAATTCCTACTTCAGAGTGTCATCACTACAAAATGCGAAAGTTGagagagggtctgaatacttttgcaaggcactgcaTGTTCTTGCAGAGTCTAAATACTACAATTGGTATTTATTAGACTTCTAGGCATTTCCAGATAAAAATGTGTCAAGTGAACaagaaaactaaatcaaaaacataaagTATCAAGCTAATGTCATGTAATTCCATACTCAACAGGCGTTCCTTCCATTTCAAACGTATTGTAGTGCTTCCTTTGAAAATTACCAGGATATCTGGTGCATGACATTACAGATCAGAATCTGGATCAAATTTACACTCTTACAATGAAACCAGTGTTCTTTGTATTATCAGGCTGATACTGCTTTCATTATACAGTCTGTCTCTAGTGatttcttcataataataattataatgttaaaaataatgttcagTGTTTCAGCCGAAGAGAAGAAATAGTCAGTAAAACCTCAGGGATTCATGCTCAGACTCGTACAAATAGCTATATCAGAGGTAAGGTGTAATTGTCATCAGACACCTGCACTGACATCCTGGCATACACATCGTCCTCAGAGCATTCTTTAAGATAACTGAGTGCTCTCACTTATGCCGGAATAATTAAATGCCTATtctactgttgttgttgttgttgttgttgttatactGATTACCAGCACCAAAATGCTAAAAATCCATTTCATTTTACCATTTCTaacttcttctttttttagcATTTTCATGGATTTTCAATTACAGTAGTTCCTTTGGGCAAAAGTTAACTGCCACATCAAAGGCAATCAATAATTTTGCAAgcaatttttaaatgaaatagtaatccaaaatatatttaaatgtattcacactGTAGTCTAatattctatatatacacaaatgtaaACAGCCTCTATGACAGAATTTAATGTATTGCCAATGTTCTTGCCAGTCATTTTTCTAttgtacacatttgtatttgatttttgatGCATTGTATCCATTCCTTGTACAATGTTTATTGAAATGAAAGTCTGTTACAGGccagtactgtacagtacagaccAGACTGCTGTAAAGGGCACACAAAGGGGAGTTTCGTTACACATTAAATAGCAATAGCATATCCAACAAAAGAGCCTGCATTGTATTGGGAGGGTATAGACCCCTTTTATGACCTCAGATTATCTTCTCACACTATACATGCTTACAGTGGAATGCCAAGAAATATTTGTCAGCAGCTAAATGTCTCTAGTTCAATAACACATACTTGGAAACTCCCCAAAGTCTCATAAAAAGTGTGTGACTTGAGTGACTCAGCACTTACAGCCTTCCATAAAAAGCCAATTCCAAGCTGGATAGTTTGAATCATGTTAATCTAATACATATCATCTATGGGATGATACACTTTTGGTCAAACTGCTGTATTATTTGCAGTATTATTAGAGATGGGACTGAGTCATTCTTACATCTTTGGTTTGCTTGCTTGTGAGTGTGTGCTTACAGCAGTGCAGAAGACCAATGTGTTTTTCAGAGGAAATATCTGTTGTCTTCATCTTGGCATGAAGGTGGTAGCAGTAAAATGATATGTTTAACAGCTGTTTTCAACATGTCTGTAACTTGCCAACTTTCCGATGTTTCTCCTTGTGCAATATGTcttgttgtgtttaatttctttaatgaCTAATCTGTCGTTTTGTCTGTATCCCATCTGTATTGTTGGAAGTGTTTGTTGGAGAGATGTCTTTTCTAATTCATATTTATGTGtaaacatgcatacattttgtgcattaaaacaaaagttttcaAACA

Function

GO: NA

KEGG:

id description
K05077 IL13RA2, CD213A2; interleukin 13 receptor alpha-2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021224 True 3456 mRNA 0.37 9 10016520 10029583

Neighbor

gene id symbol gene type direction distance location
AMCG00021225 lrch2 coding upstream 12518 9975043 ~ 10004002 (+)
AMCG00021226 lrch2 coding upstream 69037 9947160 ~ 9947483 (+)
AMCG00021219 NA coding upstream 186777 9714537 ~ 9829743 (+)
AMCG00021217 NA coding upstream 386879 9626560 ~ 9629641 (+)
AMCG00021218 klhl13 coding upstream 403386 9603592 ~ 9613134 (+)
AMCG00021229 NA coding downstream 14598 10044181 ~ 10044720 (+)
AMCG00021227 NA coding downstream 37645 10067228 ~ 10078775 (+)
AMCG00021233 upp,uprt,LOC105023903 coding downstream 244906 10274489 ~ 10279151 (+)
AMCG00021232 fgf16 coding downstream 314546 10344129 ~ 10355983 (+)
AMCG00021235 NA coding downstream 352847 10382430 ~ 10422404 (+)
G84495 NA non-coding upstream 6830 10006111 ~ 10009690 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding upstream 137653 9864686 ~ 9878867 (+)
G84298 NA non-coding upstream 1427557 8587598 ~ 8588963 (+)
G84276 NA non-coding upstream 1458102 8555961 ~ 8558418 (+)
G84244 NA non-coding upstream 1640482 8375331 ~ 8376038 (+)
G84535 NA non-coding downstream 195500 10225083 ~ 10225298 (+)
G84536 NA non-coding downstream 198322 10227905 ~ 10262453 (+)
G84549 NA non-coding downstream 250405 10279988 ~ 10361508 (+)
G84627 NA non-coding downstream 605813 10635396 ~ 10636269 (+)
G84662 NA non-coding downstream 1006998 11036581 ~ 11036826 (+)
G84425 NA other upstream 593101 9416267 ~ 9423419 (+)
G84301 NA other upstream 1383110 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 1973221 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 2895283 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 3469919 6544234 ~ 6546601 (+)
AMCG00021240 LOC107742636 other downstream 440480 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 933565 10963148 ~ 10987174 (+)
G84749 NA other downstream 2045762 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 3405724 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 3986550 14016133 ~ 14033557 (+)

Expression


Co-expression Network