AMCG00021229


Basic Information

Item Value
gene id AMCG00021229
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 10044181 ~ 10044720 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021229
ATGCGCACCGAGAATAACAATGATGCGTCGCCGAGAGTGGCTACCGGAGACCCCGGTGGAAGGGACCAGGAGAGGCTGGGGAAGCGGGGGGTAGAGCGGCAGTCGGACGCGCCGAGAAGCGAAGCTCCGTCTGGAGAGCAAACCGATCCACGGCAGCCACCCCTCGAAGACCAGCCCGCTGGCCTGGACGGGGCACAGACGTCACCCAAAGACGGGAACAGCGTGCACCTCATCGAGATCGGATGCCCTGAGACGATACCAGCAACCCCGAGCCCAGGCACCAATGCTGCGCCCCCCGGACCCGCAGCCGGGCCGGTGCCACCCGAGGGCGGGTTCGGTTGGCTTGTGGTCTTCGCGGCGACCTGGTGCAATGGCTCCATCTTCGGGATCCAGAACTCGTTCGGCATCCTGCACTCAATGCTCGCCAGTGAACACCAGGATCCGGAAGACAACACGTCCCAGTTTAAAGTGGGTGAGTATGAAGGGACACCTGTTGAtgatgctgctgctggtgctgatgCAGGAGAGGTAGATGGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021229 True 540 mRNA 0.63 1 10044181 10044720

Neighbor

gene id symbol gene type direction distance location
AMCG00021224 NA coding upstream 14598 10016520 ~ 10029583 (+)
AMCG00021225 lrch2 coding upstream 40179 9975043 ~ 10004002 (+)
AMCG00021226 lrch2 coding upstream 96698 9947160 ~ 9947483 (+)
AMCG00021219 NA coding upstream 214438 9714537 ~ 9829743 (+)
AMCG00021217 NA coding upstream 414540 9626560 ~ 9629641 (+)
AMCG00021227 NA coding downstream 22508 10067228 ~ 10078775 (+)
AMCG00021233 upp,uprt,LOC105023903 coding downstream 229769 10274489 ~ 10279151 (+)
AMCG00021232 fgf16 coding downstream 299409 10344129 ~ 10355983 (+)
AMCG00021235 NA coding downstream 337710 10382430 ~ 10422404 (+)
AMCG00021247 NA coding downstream 949064 10993784 ~ 11530471 (+)
G84495 NA non-coding upstream 34491 10006111 ~ 10009690 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding upstream 165314 9864686 ~ 9878867 (+)
G84298 NA non-coding upstream 1455218 8587598 ~ 8588963 (+)
G84276 NA non-coding upstream 1485763 8555961 ~ 8558418 (+)
G84244 NA non-coding upstream 1668143 8375331 ~ 8376038 (+)
G84535 NA non-coding downstream 180363 10225083 ~ 10225298 (+)
G84536 NA non-coding downstream 183185 10227905 ~ 10262453 (+)
G84549 NA non-coding downstream 235268 10279988 ~ 10361508 (+)
G84627 NA non-coding downstream 590676 10635396 ~ 10636269 (+)
G84662 NA non-coding downstream 991861 11036581 ~ 11036826 (+)
G84425 NA other upstream 620762 9416267 ~ 9423419 (+)
G84301 NA other upstream 1410771 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 2000882 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 2922944 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 3497580 6544234 ~ 6546601 (+)
AMCG00021240 LOC107742636 other downstream 425343 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 918428 10963148 ~ 10987174 (+)
G84749 NA other downstream 2030625 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 3390587 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 3971413 14016133 ~ 14033557 (+)

Expression


Co-expression Network