AMCG00021247


Basic Information

Item Value
gene id AMCG00021247
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 10993784 ~ 11530471 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021247
ATGATTCGACCAGATTCACAGCACCAGACCAAACAGATCTACAATACAGAGTTCAAAGGTtacttcatcatcatcatcatcatcatcatcatcatcatcactTTAAGTGGGTCACTGCCGCTCAGgGCTGACAGCTTCTCATTTCCCCGAAGATGGTCTAGGaTAAAGAAACAAGCTGACCACAAGGAGACAGGCTTGTCCCATGACTTTGTAACCGTCCTGCCGTACCTTTCGTCTCCCCACTCGGATTCTGACCTCTCCGCCGAGACCTGCAGTGCTTGCTCTTGCATGTCCATCGAAAATGTCCTCTATGTGAACTGTGAGAAAATCACCGTGTACAGACCCACCCAACTGAAGCCCCCCCCCTCCAACCTatattctGAGAACCAGCCCAACTGGGAAAGATTAAGCTGCTGTGCCATTGAGAAGGGAGTGGGGACCTTCACCTTTTCTCAGGAGAAGATTGCTATGGAAGATAATAAGCCCATATTTCAACTGTCCGAAACATCTTCCCAAGCTCATGGCTTAAAGCAGGTGAAGAGGCTTGTGGCAGAAATCACTCAGTTCAATGTAATTGACCACAATCAGAGCCACGGAGGCGACGCAGGGGATCCGCAGACAGGCGCTGCTGCCAGCAGTGACTGGAGCGAGCATTCACAAGGAGCCGGACAGGAGCCCGTAGCCCGGAGCCCACCGCAGCATGGCGGGATCTCACGGCACGGAGGGGAGGCGGGGGGCACCCGACTCCTCTCCATCCATTACCAGGTGCTTTCGGCAGCGGTCAAGCGTGCGGTCATCTCCAGCTCTCAGGATCCCTGGTTGAAGAGGCGGGTCTCCCCCCCTTCTGTCCTGCCACCACAGGATACCTGGCTCTTCCTCGTCTCGATCATTTGGATCCATGGTGCTCCTGGCAGGAACTTGAACACCAACTACTCCTTCAAcGACTATGCCACCCCTAGGGGGAAGCCTGCAATCCAGGCCaagatttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021247 True 990 mRNA 0.53 17 10993784 11530471

Neighbor

gene id symbol gene type direction distance location
AMCG00021235 NA coding upstream 571380 10382430 ~ 10422404 (+)
AMCG00021232 fgf16 coding upstream 637801 10344129 ~ 10355983 (+)
AMCG00021233 upp,uprt,LOC105023903 coding upstream 714633 10274489 ~ 10279151 (+)
AMCG00021227 NA coding upstream 915009 10067228 ~ 10078775 (+)
AMCG00021229 NA coding upstream 949064 10044181 ~ 10044720 (+)
AMCG00021245 NA coding downstream 261767 11792238 ~ 11819570 (+)
AMCG00021244 NA coding downstream 314038 11844509 ~ 11847471 (+)
AMCG00021254 NA coding downstream 575843 12106314 ~ 12107507 (+)
AMCG00021248 NA coding downstream 600724 12131195 ~ 12143466 (+)
AMCG00021255 NA coding downstream 655538 12186009 ~ 12195780 (+)
G84627 NA non-coding upstream 357515 10635396 ~ 10636269 (+)
G84549 NA non-coding upstream 632276 10279988 ~ 10361508 (+)
G84536 NA non-coding upstream 731331 10227905 ~ 10262453 (+)
G84535 NA non-coding upstream 768486 10225083 ~ 10225298 (+)
G84495 NA non-coding upstream 984094 10006111 ~ 10009690 (+)
G84690 NA non-coding downstream 160621 11691092 ~ 11691706 (+)
G84691 NA non-coding downstream 173324 11703795 ~ 11704000 (+)
G84759 NA non-coding downstream 570660 12101131 ~ 12101343 (+)
G84801 NA non-coding downstream 806331 12336802 ~ 12337139 (+)
G84803 NA non-coding downstream 807526 12337997 ~ 12338207 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 6610 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 274457 10470063 ~ 10719327 (+)
G84425 NA other upstream 1570365 9416267 ~ 9423419 (+)
G84301 NA other upstream 2360374 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 2950485 8040170 ~ 8043299 (+)
G84749 NA other downstream 544874 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 1904836 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 2485662 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 2538859 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 3898006 15428477 ~ 15432364 (+)

Expression


Co-expression Network