AMCG00021261 (diaph2)


Basic Information

Item Value
gene id AMCG00021261
gene name diaph2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13186445 ~ 13192008 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021261
ATGTTCTCTGTCTCATCTTCTAACCAGCGTGATAGAATCACCAGTTTTCGGAAATCAGGCATGAAGCGGGAGAAGCTACTCATCCAGCACCCCACAGACCCACAGTCCACCATCAGCGAGCTGCCCGTTCCCCAGCCTCTCTTCGACGATCGCTCCATGAACCTGTCAGAGAAAGAAATCATTGACCTCTTCGAAAAGATGATGGAGGATATGAATCTGAATGAAGATCGGAAAGCTCCCCTCCGTGGGAAGGATTTGAGTACCAAACGAGAAATGGTTGTCCAGTACATCTCTGCAACTGCCAAATCTGTAAGTAATGTGAATGTCTGTGCTGGTGTgtaa

Function

symbol description
diaph2 Predicted to enable actin binding activity. Acts upstream of or within cytoskeleton organization; gastrulation; and regulation of small GTPase mediated signal transduction. Is expressed in head. Human ortholog(s) of this gene implicated in primary ovarian insufficiency and primary ovarian insufficiency 2A. Orthologous to human DIAPH2 (diaphanous related formin 2).

NR:

description
PREDICTED: protein diaphanous homolog 2 isoform X6

GO:

id name namespace
GO:0042074 cell migration involved in gastrulation biological_process
GO:0040001 establishment of mitotic spindle localization biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0030041 actin filament polymerization biological_process
GO:0060027 convergent extension involved in gastrulation biological_process
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021261 True 342 mRNA 0.48 2 13186445 13192008

Neighbor

gene id symbol gene type direction distance location
AMCG00021258 diaph2,LOC107724831 coding downstream 95790 13044461 ~ 13090655 (-)
AMCG00021260 diaph2 coding downstream 270320 12910567 ~ 12916125 (-)
AMCG00021257 NA coding downstream 962137 12207338 ~ 12224308 (-)
AMCG00021252 NA coding downstream 1055508 12127083 ~ 12130937 (-)
AMCG00021253 rab33a,LOC106611995,LOC107733314,LOC107666192,LOC107730569 coding downstream 1059600 12122220 ~ 12126845 (-)
AMCG00021268 LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding upstream 215354 13407362 ~ 13410923 (-)
AMCG00021274 LOC106604457,LOC108231309,LOC102198838,LOC103366979 coding upstream 246734 13438742 ~ 13441143 (-)
AMCG00021270 drp2,LOC106611717 coding upstream 263235 13455243 ~ 13488741 (-)
AMCG00021272 NA coding upstream 353622 13545630 ~ 13555697 (-)
AMCG00021269 tmem35,tmem35a,LOC107740187,LOC107680989,LOC107724834 coding upstream 365148 13557156 ~ 13561413 (-)
G84822 NA non-coding downstream 523126 12663009 ~ 12663319 (-)
G84812 pcdh19 non-coding downstream 682943 12500240 ~ 12503502 (-)
G84785 NA non-coding downstream 983618 12198777 ~ 12202827 (-)
G84780 aifm1 non-coding downstream 1043082 12141960 ~ 12143363 (-)
G84778 NA non-coding downstream 1053288 12131302 ~ 12133157 (-)
G85003 NA non-coding upstream 559198 13751206 ~ 13755469 (-)
G85009 NA non-coding upstream 644579 13836587 ~ 13837073 (-)
G85012 NA non-coding upstream 666296 13858304 ~ 13862544 (-)
G85044 NA non-coding upstream 737834 13929842 ~ 13930281 (-)
G85058 NA non-coding upstream 773928 13965936 ~ 13966910 (-)
AMCG00021259 diaph2 other downstream 384859 12719864 ~ 12801586 (-)
G84814 NA other downstream 658751 12527093 ~ 12527694 (-)
AMCG00021249 NA other downstream 1085591 12093477 ~ 12100854 (-)
AMCG00021153 NA other downstream 6063954 7115420 ~ 7122491 (-)
G83864 NA other downstream 6639868 6544492 ~ 6546577 (-)
G84952 NA other upstream 435327 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 677931 13869939 ~ 13917868 (-)
AMCG00021302 NA other upstream 756299 13948307 ~ 13951044 (-)
G85115 NA other upstream 857966 14049974 ~ 14051897 (-)
AMCG00021304 NA other upstream 865910 14057918 ~ 14071325 (-)

Expression


Co-expression Network