Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00021302 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 13948307 ~ 13951044 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00021302 | False | 408 | mRNA | 0.54 | 4 | 13948952 | 13951044 |
| TU106113 | True | 608 | lncRNA | 0.49 | 4 | 13948307 | 13949820 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021301 | NA | coding | downstream | 10149 | 13930836 ~ 13938158 (-) |
| AMCG00021290 | NA | coding | downstream | 23715 | 13896893 ~ 13924592 (-) |
| AMCG00021284 | NA | coding | downstream | 52032 | 13881140 ~ 13896275 (-) |
| AMCG00021288 | NA | coding | downstream | 161050 | 13775039 ~ 13787257 (-) |
| AMCG00021285 | NA | coding | downstream | 176896 | 13755695 ~ 13771411 (-) |
| AMCG00021299 | mcts1 | coding | upstream | 3007 | 13954051 ~ 13964211 (-) |
| AMCG00021300 | NA | coding | upstream | 49552 | 14000596 ~ 14013160 (-) |
| AMCG00021298 | NA | coding | upstream | 86189 | 14037233 ~ 14040889 (-) |
| AMCG00021303 | NA | coding | upstream | 94991 | 14046035 ~ 14047696 (-) |
| AMCG00021311 | NA | coding | upstream | 115562 | 14066606 ~ 14073961 (-) |
| G85044 | NA | non-coding | downstream | 18026 | 13929842 ~ 13930281 (-) |
| G85012 | NA | non-coding | downstream | 85763 | 13858304 ~ 13862544 (-) |
| G85009 | NA | non-coding | downstream | 111234 | 13836587 ~ 13837073 (-) |
| G85003 | NA | non-coding | downstream | 192838 | 13751206 ~ 13755469 (-) |
| G84822 | NA | non-coding | downstream | 1284988 | 12663009 ~ 12663319 (-) |
| G85058 | NA | non-coding | upstream | 14892 | 13965936 ~ 13966910 (-) |
| G85059 | NA | non-coding | upstream | 17091 | 13968135 ~ 13968382 (-) |
| G85089 | NA | non-coding | upstream | 78646 | 14029690 ~ 14034000 (-) |
| G85091 | NA | non-coding | upstream | 83180 | 14034224 ~ 14036645 (-) |
| G85251 | NA | non-coding | upstream | 598548 | 14549592 ~ 14554392 (-) |
| G85037 | LOC100846954 | other | downstream | 30439 | 13869939 ~ 13917868 (-) |
| G84952 | NA | other | downstream | 320560 | 13627335 ~ 13627747 (-) |
| AMCG00021259 | diaph2 | other | downstream | 1146721 | 12719864 ~ 12801586 (-) |
| G84814 | NA | other | downstream | 1420613 | 12527093 ~ 12527694 (-) |
| AMCG00021249 | NA | other | downstream | 1847453 | 12093477 ~ 12100854 (-) |
| G85115 | NA | other | upstream | 98930 | 14049974 ~ 14051897 (-) |
| AMCG00021304 | NA | other | upstream | 106874 | 14057918 ~ 14071325 (-) |
| AMCG00021387 | NA | other | upstream | 2283273 | 16234317 ~ 16242655 (-) |
| AMCG00021412 | NA | other | upstream | 2696095 | 16647139 ~ 16649940 (-) |
| AMCG00021435 | hdx,LOC107572093 | other | upstream | 3335205 | 17286249 ~ 17303470 (-) |
