AMCG00021321


Basic Information

Item Value
gene id AMCG00021321
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 14409984 ~ 14431883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021321
ATGGAGAGAAGCCGGTCTGGATTGATGCAGCTGAGCGGCGAGGTGCAGAGGCTGCTCCCAGGGAGAGATGATGCTCTGCACCGCACACCTCTGCTAGGGACAGATGGCCCTGAGTTTCCCCTGCTctgctgtgtgaatgtgtttgaCTGTGATCTCCGCTCCACAGACACCCAGAGAGCAGTGGACCTGCTGGAGCAGTACCAGACCAGTCTCACCAGCCCAGAGGAGCAGGGCTTGAGAACCAGTGTGGGGAAAGTCTCAGCCATCTTTGGCAGCCAGCTGTTCCAGGCTCTGCTGGatATCCAGGAGTGCTACGAAGTGACGCTGAGCCTGAACTCTGTGGCAAATGGACAACAGCCAGAAGAAAAGGAGTCAGACCAGGAGGAGAATgaggagAGATCAAACCCCGAGAGCCAGGATGGTGTGTTGCGGGTTCGAATCACAAGCAGGAGGAACTTTCAGAAGGTGGAGAGGGTGTCTGGCCTGGTGAGCCGCTCTCACATCGAGGTGCCCAAGGAGGTCATGTGCCCTGGGGTGCAGCGACTGTATAGCGGCCAGGAAGCCACAGCTGGTGTTGAGGCTCCGCCCTTTTTCTACCCACACCTGCACAGTTCCCCAGGTGCAGGATGGCTGGACAGCTCTGCAAATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021321 True 651 mRNA 0.58 5 14409984 14431883

Neighbor

gene id symbol gene type direction distance location
AMCG00021319 dlg3 coding downstream 31107 14341482 ~ 14378877 (-)
AMCG00021318 NA coding downstream 97863 14254543 ~ 14312121 (-)
AMCG00021314 cdx4,LOC107577192,LOC107665429,LOC107751993,LOC105902638,LOC107561517 coding downstream 183776 14220968 ~ 14226208 (-)
AMCG00021313 chic1,LOC108269065,LOC105902642,LOC105029454,LOC108432961,LOC106604725,LOC103037960,LOC107658118 coding downstream 190565 14212668 ~ 14219419 (-)
AMCG00021315 NA coding downstream 202092 14199118 ~ 14207892 (-)
AMCG00021320 NA coding upstream 4897 14436780 ~ 14449385 (-)
AMCG00021327 NA coding upstream 35326 14467209 ~ 14486022 (-)
AMCG00021325 NA coding upstream 62077 14493960 ~ 14500889 (-)
AMCG00021326 rab41,rab6c,LOC106604734,LOC107560298 coding upstream 69786 14501669 ~ 14512268 (-)
AMCG00021328 NA coding upstream 84081 14515964 ~ 14522976 (-)
G85091 NA non-coding downstream 373339 14034224 ~ 14036645 (-)
G85089 NA non-coding downstream 375984 14029690 ~ 14034000 (-)
G85059 NA non-coding downstream 441602 13968135 ~ 13968382 (-)
G85058 NA non-coding downstream 443074 13965936 ~ 13966910 (-)
G85044 NA non-coding downstream 479703 13929842 ~ 13930281 (-)
G85251 NA non-coding upstream 117709 14549592 ~ 14554392 (-)
G85332 zic3,LOC107744514,LOC107601137,LOC107658104,LOC102782288 non-coding upstream 609180 15041063 ~ 15043903 (-)
G85456 NA non-coding upstream 887215 15319098 ~ 15378748 (-)
G85471 NA non-coding upstream 949469 15381352 ~ 15383931 (-)
G85470 NA non-coding upstream 999159 15431042 ~ 15432371 (-)
AMCG00021304 NA other downstream 338659 14057918 ~ 14071325 (-)
G85115 NA other downstream 358087 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 458940 13948307 ~ 13951044 (-)
G85037 LOC100846954 other downstream 492116 13869939 ~ 13917868 (-)
G84952 NA other downstream 782237 13627335 ~ 13627747 (-)
AMCG00021387 NA other upstream 1802434 16234317 ~ 16242655 (-)
AMCG00021412 NA other upstream 2215256 16647139 ~ 16649940 (-)
AMCG00021435 hdx,LOC107572093 other upstream 2854366 17286249 ~ 17303470 (-)
G85953 NA other upstream 2987721 17419604 ~ 17423418 (-)
G86010 NA other upstream 3115279 17547162 ~ 17552766 (-)

Expression


Co-expression Network