AMCG00021332


Basic Information

Item Value
gene id AMCG00021332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 14730558 ~ 14737743 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021332
aaacacacatatgcacTCAGAGGTCCAAGTAACCTTTTGTTTCCCCGCTGTGTAAACAGGCGGATGTACTTTGGAGCGCCGGATCGATCAGATGGCTTCTTTCCCTCAACTTCACAGCAAGAGACTTTCTCACTGGAGCATGATGGCAAAATTCTCTTCGCTTTTAGTGATCTTTGTCATCCTGCAGGAATGCAGTCTGAGCTGTCAAGGATCAGTGTTCATCTCTCAGCGCTCTGCCACCTCTGTGCTGCGGAGAGAGCGGCGCTTCAACAATGGCCTGTTCGAGGAGATGCGCCCGGATAACCTGGAGAGGGAGTGCTACGAGGAGAAGTGCAACTTCGAGGAGGCCAGGGAGGTCTTCGAAAACAATGAGAAAGCAATGGAGTTTTACTACACATATGTTGATGGTGACCAGTGCAAGTCCTCGCCCTGCCAGAATGGGGGCCAGTGTAAAGATGATATCAAATCCTATGTCTGCTGGTGCAAACCTGGGTATGATGGCAAGAACTGTGAGATAGGCCCGTTCCCCTGTGGCAGGTTGGTGAAAAATCTAAGCCCCAGCCTCTCCAAAGTCGAACGCGGTACAGTCGTCCTGTCCTCGCTGGATACCAATGAGACGGAGACCTTGGCACTCAACAATGCCACCAACACTACTAAAACCCTCAACACTACGGcccccaccaccatcaccaccaacCCCTCCCTGGGCAAACTTTCCATCCATGCCGAGACGAAACTTGACACTCGCATCGTGGGGGGGGACACCTGTCAACCTGGGGAGATCCCCTGGCAGGTGGTGATTCTTGATAAAACCAGTGAACAGTGGTTCTGCGGAGGCTCCATCTTGAGTGAGCACTGGGTGGTGACGGCAGCACATTGCTTTGACAGATTTAAAGAGGCGCTGCCCATCATCATAGTGGGTGAGAATGACATGACCAAGCATGAGGGCACAGAGAGCAAGCACCACATCAAAGAGCTGTACATTCACCCTCTATATGACAAGGCCATAAGCCCGCACAACCACGACATCGCGCTGCTGCATCTCAAGGAGCCCATCGTCTTCAGCGCGTTCGTGATGCCTGTGTGCCTGGGGTCCAAGGATTTCACTGAGATGCTGATAAGCTCAAACGCAAAGTCCACAGTGAGCGGCTTCGGCCGGCTGGTGCAGGGTGGCCCACAGGCCTTGGTGCTGCAGAAGCTGAGCGTGCCGTACGTGGACCGGTCACTCTGCAAGGAAAGCAGCTCCGACAAGGTGTCACGCTTCATGTTCTGCGCTGGCTACTCCAACGAGAGGAAGGACTCCTGCCAGGGGGATAGTGGGGGGCCCCATGTCACTAAATATCATGACACCTATTTCTTAACGGGGATTGTAAGCTGGGGGGAGGGCTGTGCCATGGAAGGAAAGTACGGCATCTACACCCGCGTGTCAATGTACTCTAAGTGGATCAGAACCGTAATGAGCAACCATTCATTAAGCCAAAGCTCTGTAGGGGCCTCCAGTGTTTAAGCCCTATTTCAGTTCCTTGATAATCATCTGGAATTACACTGCACATAAATATACACCATTGCTGTTATGCATATCTTAGGCACAGTTAAAGAGTTGCCTTGGCCTGTAAAACTGTAGGATGTTAAGTGAAATACTCTGGTCAGATTACACATTTCACAGAACAATGGGAGGAGAAACCTCTTCATATCTACAGGATCGATGGCTAATAACATTGCATTTAAAGTGCTAACATTGTAATTGCattgcaaatacaaaacagttatTGAAGTTACTCTCTTCTCAGCTCTTTCTAATCAAGTCTTTCATTTCCTCCCTTAAATGGAGAAACCGGAGAATTGCCTTCATCAATGTATATCATTGAATAAGACCCCATATTTTGCACAAACTATTGCACTGATTTggcttattataataattgatttcACATCTTAACCCAATCAAACATATGGACTCCCAAAGCCAAAGAACAGAATCCTATATACATCTGCAGTAGCTGTGCAGACATTCCCCTGTGTTTGATGTTAAACCAATCCTTTCTTTATTGCTTATAGAtcaattttaatcaaatgtaaaataatgaaaaaaaataaaaataaaacgtttttaaaacattttttacattgcTCTCAACCAGGAGTGCTGACAACTGCAGCAAATCAGGGGTACAGGGAACGATTTACAGCACCAGTGGAACAGGAAAGTATAATACGACCAAAttgcaaaaccaaaatattagcaggaatattcagaaatatatgcAGTGAGGCAAACTGCGTGCCAGGAAAAATGCTTTGGTAAAGGGGCTTACATGAGCAGGAAGGGACTGGGATTACACACAGAGTTCACTGCCGATGAGCAggcttcttattttattttgtccccCAGTAAATCAGATTGGAAAGCATTTGAGGCATTAATGCAGATcactgtctgtttatttatttatttattttaacactagTTCCCCCTGGTTTAATATCAGTTGTTATTGTTGCAGCTCTGTGCCCTCTACCTGATCTCTCCATCACTGGCATAATTAAACCACCTCTCATTCTTCATTCAGCGCAGAACAGAACCAACACTGAAAACCAAGAGTCTGAGGTGGAATAGCTCCATCAGGTGGTAGTGGAGAGCAGTGTACAGTACTAGATATTAAGGGGATATACTGTACACTTGCCTTCAACCAACACAATGCCAGTGCTAGTTCCGTCAGGGCAGAATCAATTACTGACTTTTCATCTTAACAGGCCTCCTGCAACAAGTTAAATTGTGAACCTGGGACTTATATCTGAAAAATACACCCAATCTTCATtagttattcatattaattctcTTCCTTATGGGACATATGTAGGTTTTACACTATATTCAGACCCTGGATACAGATTCCCAACTTGCCCAATGCCCTGCAGCGCTAGAACAAAGGAAACTGAAGAGAGTTTAGCTGAACTTGACCTTAAACTCACAATATAATTTAAGCTTACTCTAAGAGAGACATAAGAATGCATTGTACCAGTTATTATGTGGGGAGGAAAAcacaaacgttttttttttacaaactttttattttatctgtataTACAACAGAGAGGCTATATAAGAACTAAAATGCATCAttgacaataacaataattataataacaaccTGGGAACTATATCCATCATTCAACATCTTGCAGCCATGCTTCATCTATGGAAaccttaaaaatataacataGCATACAGCATCTGACACATTGCACAGCATTTCAAGCattgaaaagaaacacatttttaagttCAGTGCAAAATCTGCAGGATTTGtatgaaaggaaaacagaaacctaaaaaatatgtaataaacacTGTATGAATTGCACTGCAATCACACaacattctttttttccctgtacATAAATATGAATGCCTGAAGTCAAATAGCCATTTCATTCTGCCAGAAACAACTTCATagactggggagggggggctccTCTGTCAGAGCTGTTACTGCTGATTTAAATCCTAATTTCCACTTCAAAAAGCACAAAATCAAAG

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01321 F9; coagulation factor IX (Christmas factor)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021332 True 3541 mRNA 0.44 7 14730558 14737743

Neighbor

gene id symbol gene type direction distance location
AMCG00021328 NA coding downstream 207582 14515964 ~ 14522976 (-)
AMCG00021326 rab41,rab6c,LOC106604734,LOC107560298 coding downstream 218290 14501669 ~ 14512268 (-)
AMCG00021325 NA coding downstream 229669 14493960 ~ 14500889 (-)
AMCG00021327 NA coding downstream 244536 14467209 ~ 14486022 (-)
AMCG00021320 NA coding downstream 281173 14436780 ~ 14449385 (-)
AMCG00021336 NA coding upstream 286265 15024008 ~ 15028310 (-)
AMCG00021338 tm9sf2,LOC108432943,LOC105912543 coding upstream 391722 15129465 ~ 15147275 (-)
AMCG00021341 NA coding upstream 464428 15202171 ~ 15206402 (-)
AMCG00021345 NA coding upstream 497966 15235709 ~ 15244700 (-)
AMCG00021342 NA coding upstream 523179 15260922 ~ 15263404 (-)
G85251 NA non-coding downstream 176166 14549592 ~ 14554392 (-)
G85091 NA non-coding downstream 693913 14034224 ~ 14036645 (-)
G85089 NA non-coding downstream 696558 14029690 ~ 14034000 (-)
G85059 NA non-coding downstream 762176 13968135 ~ 13968382 (-)
G85058 NA non-coding downstream 763648 13965936 ~ 13966910 (-)
G85332 zic3,LOC107744514,LOC107601137,LOC107658104,LOC102782288 non-coding upstream 303320 15041063 ~ 15043903 (-)
G85456 NA non-coding upstream 581355 15319098 ~ 15378748 (-)
G85471 NA non-coding upstream 643609 15381352 ~ 15383931 (-)
G85470 NA non-coding upstream 693299 15431042 ~ 15432371 (-)
G85498 NA non-coding upstream 835883 15573626 ~ 15575997 (-)
AMCG00021304 NA other downstream 659233 14057918 ~ 14071325 (-)
G85115 NA other downstream 678661 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 779514 13948307 ~ 13951044 (-)
G85037 LOC100846954 other downstream 812690 13869939 ~ 13917868 (-)
G84952 NA other downstream 1102811 13627335 ~ 13627747 (-)
AMCG00021387 NA other upstream 1496574 16234317 ~ 16242655 (-)
AMCG00021412 NA other upstream 1909396 16647139 ~ 16649940 (-)
AMCG00021435 hdx,LOC107572093 other upstream 2548506 17286249 ~ 17303470 (-)
G85953 NA other upstream 2681861 17419604 ~ 17423418 (-)
G86010 NA other upstream 2809419 17547162 ~ 17552766 (-)

Expression


Co-expression Network