AMCG00021356


Basic Information

Item Value
gene id AMCG00021356
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 15480851 ~ 15489397 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021356
GCGGAGTGATAAACAGGACGGCAACTCGGGAGGCTCGCTGAGataattcatttgttttaaacattaggACCAGTCAACCCGATGGCGTAATGAAATCGGATACAAGTGTCGGTTTGGCCCTTTTCTCTTTGTAGAAGATCAGAAGAGTCCGGACTTTGAATTCTCCTCAGttcctgcttttttcctgtttttgtgtgaGCCAGCCAGCTCAGTTCAATCAAGTCTGTGAGGATGAGATGGTCTCGGCCTCACTGCACAAACGCGATGATTTGAGGTCGGTTTAGCGTGTTTGTTTCCAGATGCATTGAGCCTTCTGTTGAAAAACACTGATTAGCAAGTTACAAGCACTAGAAGTGGGTCgaggaatatttattttttcgaTGGGGGTATGTGGGCCGTCCCCCCTCAGAAAGCATGTCGAGTATTATTGTTTGAGGATCCCGTACAGCAAAGCACGGTCGGGCTAAAGCAGCGGAGGTGTGCCTGAACCAAAACGAGGGAGTCATACGGGTACATATATTATTTGGGGTCGCCAACCCCAAAGACAAGGACTTGCTGAAAGAGACAATATCTCGCTTGACCACCAAACGAAAACAAACCAAGCGACCAACAATGAAGCGAAATTGTAATCGTGGTTTAAGATCAAACTAAAACACTTCTCGCATCCATCCcacaatccatccatccaaggCTACGGTTGGCAACAAATGGTGCCGTAGCGATTGGCGCAGTTTGGCAACACATGCGGTAGAAATGAGCGACCGTGCAATCATGTCGCAAGAGAAAATGGAGCTGGACCTGGACATCCCGATATCCTTGGCCCAGACCGACGGCAATTTAAGGAGGTCGAATAGTGCACCGATGATTAACGGGTTAAGTGACAGCACCCAGGTCTTCCAGAGAGACGTCCTACGCAGCCGGAGAAACAGCACCACTGTCGTGAACCGGCAGAGTCTGGTggtcccctcctctcccatcagaGTCCCCAGCAGCCGGATTCATCAGATTAAACAGgaGGAAGGTGTGGATGTGATGAACAGGGAGACGGCCCACGAGCGggaggtGCAAGTAGCTATGCAGATGAGTCAGTCATGGGAGGAGAGCCTCAGTCTGCAatgcttctctccctctctccaaaTCCTGGTGAGCAGCAACGGCCTCCCGCCCAGCCCCATCCCCAGCCCCACCCGCCGCTTCACCACAAGGAGTCAGAGCCCCATTAACTGTATCAGGCCCAGTGTCCTCGGGCCCATCAAACGCAAAGGCGAGATGGAAACGGAGAGCCAGCCAAAGAGACTGTTCCAAGGAACGACCACCATGCTGTCGTCCGAGGTCCACCCGCCTGACCTGAGCTCCTGCCTCTCCTCAGATCTTCTGGATGGCAGTCTCAGCAGTGTGGGCTCCTCCTCGGACTCCCCGCCCAAGACCAGCACCGTGTCCCCATCTCCCAACACTTCCCCCTTCGCCTCGGTCCACGACATCTCCCCAAAGTGATCTCCctgtgagagagaagaggaggaggatcAAGCAAGCAGCTGTCTGGgcttgggcttttttttttcttctctccatccttctccaacttttttttttttttaagaaacaatgtTTCAAAAGCCCTGATCTGTCTGCTTTGTCAgtcatatttttgaaagcacacTTTCCTTACAGACAGGCATGTCGGTAAAAGAGCAGGTTTGGAAACTGGTTGCCGCATTCCCCATGTTGGCTCCAGCTGCTATAGTTTACTACAAGGTGCTGACCCCTAAATAAGAGCTGGAATGGCATCAGTTTCCTAACCAGCTCGGCTACTTCACTTCCAAAGTATTTTTCAGCCAACAACACGTTTCTGGCTGTAGATGTGTAAGTTGCACAGGTCTGCAGTTCACATTCACAGTCAAGACTTTAGGGATTTAAGATGAtcctaaaatgtataattcagcACAATAGATCAGTGCACTGATGTGTACAAAAAGAATGTTGCAAAGCTGTCTGTTTACGCAAATACTGTGTAAATGAATATTGTAGTGTAAATGgctctaaaaaaatatttgtaattgatgGTTGGGCTAAGGGGTcctaaaaataaactgacatttattttatcttcctGCCCCTCCCCAGAAGAGGTGGAGAACCTGGGCTGTGGAAAATTTACAGAACTTCCTCCCAGGCCAGTCCCGTCTGTAACTGCCTTTCTGGGGTGCTGGCTGTCGGGCTGCTCTATACAGTGCACTCTGCAGAGACCCTATATCAACTGGTCTTGCTTCTCTGACGTGCAACGGTGACCTGGTGACTGGCTGCCCCACTGtgaatacagaacaaaaagacTGCACATTTTGTGAGGCTGGTATGGAAGCCGTCGGGACAACTTCCTGAGCTGGTTGCAGAAGGCTCCTTAAGCTGCTCTCGTTCGAGAAGTGCTGGGAGAGGGATTTAAGTTCACCCATGATCATCTGCCAGGGCCCAGGCTGTTCTTTCTGTGCAATTTTGGAAGAGCTTTTtatttggggggtggggagttCTTCCTCGCAGCCTGGAGGGGAATTGACTTTGGAGGTGCTGTAAGAGGAGAGTGAAGAAACTTGAAAGCCGGTAGGTGTCTTTGATCCGCACTTGAGCTGTCCAAAACATTTCAACACGCTAAGCTCTTGTGTGTTGGGGCAGGCCGGGCACTGTCCTTACCTTTTGATTCTGGATGTATTTGTATGCACTTACAGAACTCCCAAGAAAACCCAGCAAAGGCTCCTGCCAATCGCAGTGGGGATGGGAGTTGCACTACTGGGTCAAGCCAAACTTATTCTTGGTCGTGGTCTCGGAGACACCGCGGCATAGCTGCACAACTGTTCAGTGTACTCCTGAACTGAAGCTGCAGGAGAGTTTTCTGGGACAGCACACCCATCCCGTCGGGGACTCGGACGCACTCGGGTGCTGGTTTTCATGGGAGTCGTGCTGCTGCTGTCGTTTTTGCACGTTAGTCCAGCTCGGGGAGCCGCCGAGTAGTCACCTCACGCGCATACCTCGCAGCCTGAGGGGCTGGTGCCTGAGATTCACAGCCGGTGCTACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021356 True 3069 mRNA 0.50 9 15480851 15489397

Neighbor

gene id symbol gene type direction distance location
AMCG00021352 ddx26b,ints6l,LOC107601122,LOC107560701 coding downstream 18801 15434040 ~ 15462050 (-)
AMCG00021351 slc9a6 coding downstream 54201 15407884 ~ 15426650 (-)
AMCG00021353 NA coding downstream 93329 15384103 ~ 15387522 (-)
AMCG00021347 NA coding downstream 176119 15287225 ~ 15304732 (-)
AMCG00021343 NA coding downstream 197962 15280349 ~ 15282889 (-)
AMCG00021357 hprt1,LOC105912559,LOC107601120 coding upstream 26222 15515619 ~ 15526183 (-)
AMCG00021355 LOC107751967,LOC107560772,LOC107661382,LOC107658087,LOC107601119 coding upstream 39272 15528669 ~ 15535134 (-)
AMCG00021364 NA coding upstream 373497 15862894 ~ 15870530 (-)
AMCG00021376 NA coding upstream 512822 16002219 ~ 16008079 (-)
AMCG00021382 rab39b,LOC103034714,LOC108428007,LOC108278912,LOC106602960,LOC106609056 coding upstream 630791 16120188 ~ 16121592 (-)
G85470 NA non-coding downstream 48480 15431042 ~ 15432371 (-)
G85471 NA non-coding downstream 96920 15381352 ~ 15383931 (-)
G85456 NA non-coding downstream 102103 15319098 ~ 15378748 (-)
G85332 zic3,LOC107744514,LOC107601137,LOC107658104,LOC102782288 non-coding downstream 436948 15041063 ~ 15043903 (-)
G85251 NA non-coding downstream 926459 14549592 ~ 14554392 (-)
G85498 NA non-coding upstream 84229 15573626 ~ 15575997 (-)
G85530 NA non-coding upstream 261154 15750551 ~ 15755446 (-)
G85535 NA non-coding upstream 315339 15804736 ~ 15861947 (-)
G85543 NA non-coding upstream 374334 15863731 ~ 15903367 (-)
G85568 NA non-coding upstream 431625 15921022 ~ 15934177 (-)
AMCG00021304 NA other downstream 1409526 14057918 ~ 14071325 (-)
G85115 NA other downstream 1428954 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 1529807 13948307 ~ 13951044 (-)
G85037 LOC100846954 other downstream 1562983 13869939 ~ 13917868 (-)
G84952 NA other downstream 1853104 13627335 ~ 13627747 (-)
AMCG00021387 NA other upstream 744920 16234317 ~ 16242655 (-)
AMCG00021412 NA other upstream 1157742 16647139 ~ 16649940 (-)
AMCG00021435 hdx,LOC107572093 other upstream 1796852 17286249 ~ 17303470 (-)
G85953 NA other upstream 1930207 17419604 ~ 17423418 (-)
G86010 NA other upstream 2057765 17547162 ~ 17552766 (-)

Expression


Co-expression Network