AMCG00021364


Basic Information

Item Value
gene id AMCG00021364
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 15862894 ~ 15870530 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021364
caagcaCAGAGGAGCTGGACACATCATCACACCGAGGAggacaaaactaaaactttgCAAAACACTCCACACCTACTACCACAGgatGGCGCAGGGATTCGCCTCAGTGTTCTACAGCGAGCCAGCGGTGCTGGGTCTTCTTGCCAACGTCTTCAGCGCCTTCTACGTCGCGCTGCAGAATTTTGCGCGCGTTGCCACCGACAGACAAGCGCTGGGCCTTGAGAACATGCTGGCGGGAGTGCACCTCATCTTGATCGGGGGCATTGTGCAACTAGTGGCCGGGCTGCTCACCTTCCGCAAGTATGACCACCTGGCCGGGACTACATTCGTGGCCTTTGCAGCACTGTGGGGCAGCTACGGGGCGACGCGGATCGTGCTGGGGAGTTCAGAGCCGTGGAACCTCACCCTCCCTGGCAATGGCAGTGTGCCCCTCCCCAGCAACAGCACGCACCCACCTGTAGAGGAGTCCGCGTTGGCGGGGCTGGTGGCTTACATCAGCGTGGCGTTCATTGTGTCCTTCTGCTCCGCCACGGCCAACTATATCATGCCCTTCGTATTTGGTGCCATCACCATCACGCTTGTTTTTGAGGCAGTGGGGCTGTTTGCCACCTGGTCGCTGGTGGTGTCGGGCATCACTCAGATGGTCATTGTGTGCTGCGGCTTCTACGGGGCGGCGGCCCTGCTGCTGAAGGGGCTGTACCAGCGCCATGTGCTGCCTGGCTTCGGCAACGCGCTGTTCGACGTGCTGCTGCTGGGCGCCAAGATCAAGCCCGCGCAGCGCAAGCAGGCAGGCCGTGgcactgaggaggaggagaagaagaagaacagcaCGTATGCTGAGCCCCTGGCACTGGGCAACATGAGTGACACGGTGTCCGCTGCCATCCTGGCCTTCTACTGCTTCGGCTACCCACGCTCCTTCCAGGTGGGAGTCCTCTGGGTGACCATCAACTCGGCAGCTCAGCTCCTGGCCAGCTACTACGCCTGCATGCGCCTGGACATCTTCCACGCCACCAAGTTTGGTCTGCACTGCGGCTACTGGCTGGTGCAGAGCTGGGAGGAGTTCGTGGCCTCAGTGGTGCTAGTCAGCAACGGGAGGGAGGAGCTCAGCGAGGCACGGGCGGCCATGCTGGGTGGATGGCTGTTCCTGGCATCTGCCCTGCTGCTGTGCCTGTTCTCCCTGTGCCGCAACCGCCTAGAGCTCCTGCACAATGCCGCCTTTGCCCTGCTCACGATTTCCACGCTGCCCCAGATCCGTGGCCAGGCACACTACACGTTCTTCGGGGTGGCCTGCGTGCTGTATGCCGTGCTCAGCCTGGGCATCTCCTTCATCAGCCTGGTCAACTCCATCGCAGAGAAGGCCTTGATCCCACTGGGTACCCGACTGGTCAGTGCGGTACAGTTGCAGGAGGTGTTGTTCGGCCTGAAGCGCTGCTTCACCCCCTATGCCATGCCACTGCCCGCCGCCTGTGAACCCCGAGACCTGCGGTCCCAGCTGCCGGATGCCCTGTTCTTCCTGTGTAATGGCCTTGCTGCACTCTCTGCCATCCAGATCTCTGGCTCCTTCCCTCTGCGCTACTACCTGTCCGTGCCCTGGGTGCTGATTCCTGGCACAGTGCTCCAGCTCTACGTGGCCCGGCTGCAGGTTCGAGGAGGCCGCCGGTTCGGGCCCACACTGCCGTTCTGCTACGCCGCCATCTGGGCCGCCTGGACCTGGCTGCGGTTTGCAGgCCCCACCATGAGCATTCCCGAGCCCTCTCTGCATGCCTTCACCACTGGCGCTACGGCCTTTCTCGTTATCAACAGCTTCATCATCGTCATGGctGGCTACTTCAGTGTGGTGATGCTGGTCCTGACAGCCATGATGGAGGTGCTCATTGTTTGCTTCCTGTTGTTCACGCTGAACAAACTCCCACTTCCTCTTGAAGAAGTGTTCCTGGCCCTCTTCACTGTGCTGTGTCTCTATGGCGCCACTGCTTCCTTCGCCAACTACCTGTTCGAAAAGAACCTAATTCCCATGGGGCCGCAGCTGATGAAGTCTGGGCGGAACAAGAAGTCTGAGACAGatgccctgccctgcccctgccccaCTTCCCAGAAGACCAGTGGGCTGCTGACCATTGCGCACATTCTGGAGTCCGGGGGTGTGTGCGGGGTGCCATCTGACACTGTGTACACACTGGCCGCCTCCTGCAAGCACCCAGCCGCCATTGAGCGCATCTACAACATCAAGGACCGTCCCATGGAGAAGCCAATCTGCCTGACAATCGGTAGCCTGGAGCAGCTGGAGGATGTGAACCCACCCTTCAGCCCGCTGCTGTGGGAGTTCATGAGGAATGTCTACCCAGGGGGCATCGGCTGCATTGTCAGGAAGGGAGAGTGGCTGAAGAAACTAGGGGTGGGCCCAGCCTATGACTACGTAGGCACCAAGGACAGCATCATGATCCGCATCTCGGACCTGACTGTTACCACGCACCTGCTCAGCATGACCGGGCCCCTGGCCATCACCTCTGCCAACCCCAGTGGGGAGCCAGACAGCACACACCATGACATGGTCATCACGCGTCTGGGACACAAGGTGGACGGCGTGTTGTGCGATGGTGACTCCACTGAGCTGGTCTCCTCCACAGTGGTCATCTGTACCAAAATTGACGAAGGGAAACTGTCATTCCTGAGAGAAGGGGCAGTGCCCAAAGCCAAAGTCCTGCAGATATTCGAGCGTGTCCAAAACAAGATGGCCATCGTTGATGCAGCATAAAGAACAGATCCACCTTTCTGCCTCTAAACCTCACAGCCTTTCTGGGGCTCACATGGCAGAGcagaacacaacaaaaaaacctaCAAAATATAACATGAACTACAGTAATTCACCTTTATATGCTGGAAGACTGAGAACGAATACTTGcggacaaatgcattttaaaagaacaataacgtttttctttttcttgtggAGGTGATACGGGTTGGTAATGGCAGAAATGACTCCAGTGGTATAGTCATATTTCAGCTTGTATATTTCAGTGCAGTTGTCAACACTCATATCTATGACtacaaggagagaaaaaaaagttaatatttgtatttatttaaatgaacctTAATGTATACACTAGGAGTATCTTTTGAGAAAATACTCTGAAacacattgtaaatatttagtttgtgtatatatgtatttgtacagCTTACTCACATTTTTGCTGTGGtgcaataatttgttttttaataaggaTTGTGATATCTAAGTGGTACATGCTGTGACATGCAGAATGTCTGCTTAAAGGATACAGAAAGTGGCAACCAAAATGGCAACAATttgtacataataaataaatatgcatttgaaattaTAGTGTGGGTTACAATTTGTCTAGGAAGATGAATCTAACAAGCTGTGCTTAATTATTAAACAGGT

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021364 True 3418 mRNA 0.55 11 15862894 15870530

Neighbor

gene id symbol gene type direction distance location
AMCG00021355 LOC107751967,LOC107560772,LOC107661382,LOC107658087,LOC107601119 coding downstream 327760 15528669 ~ 15535134 (-)
AMCG00021357 hprt1,LOC105912559,LOC107601120 coding downstream 336711 15515619 ~ 15526183 (-)
AMCG00021356 NA coding downstream 373497 15480851 ~ 15489397 (-)
AMCG00021352 ddx26b,ints6l,LOC107601122,LOC107560701 coding downstream 400844 15434040 ~ 15462050 (-)
AMCG00021351 slc9a6 coding downstream 436244 15407884 ~ 15426650 (-)
AMCG00021376 NA coding upstream 131689 16002219 ~ 16008079 (-)
AMCG00021382 rab39b,LOC103034714,LOC108428007,LOC108278912,LOC106602960,LOC106609056 coding upstream 249658 16120188 ~ 16121592 (-)
AMCG00021388 rbmx2 coding upstream 339208 16209738 ~ 16212465 (-)
AMCG00021392 NA coding upstream 345906 16216436 ~ 16217455 (-)
AMCG00021393 LOC106603592,LOC106567886,LOC105023927,LOC107587290,LOC103395138,LOC100711063,LOC102300059 coding upstream 486735 16357265 ~ 16359007 (-)
G85535 NA non-coding downstream 947 15804736 ~ 15861947 (-)
G85530 NA non-coding downstream 107448 15750551 ~ 15755446 (-)
G85498 NA non-coding downstream 286897 15573626 ~ 15575997 (-)
G85470 NA non-coding downstream 430523 15431042 ~ 15432371 (-)
G85471 NA non-coding downstream 478963 15381352 ~ 15383931 (-)
G85568 NA non-coding upstream 50492 15921022 ~ 15934177 (-)
G85569 NA non-coding upstream 54428 15924958 ~ 15929779 (-)
G85580 NA non-coding upstream 106035 15976565 ~ 16020742 (-)
G85590 NA non-coding upstream 122722 15993252 ~ 16001221 (-)
G85592 NA non-coding upstream 140701 16011231 ~ 16011702 (-)
AMCG00021304 NA other downstream 1791569 14057918 ~ 14071325 (-)
G85115 NA other downstream 1810997 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 1911850 13948307 ~ 13951044 (-)
G85037 LOC100846954 other downstream 1945026 13869939 ~ 13917868 (-)
G84952 NA other downstream 2235147 13627335 ~ 13627747 (-)
AMCG00021387 NA other upstream 363787 16234317 ~ 16242655 (-)
AMCG00021412 NA other upstream 776609 16647139 ~ 16649940 (-)
AMCG00021435 hdx,LOC107572093 other upstream 1415719 17286249 ~ 17303470 (-)
G85953 NA other upstream 1549074 17419604 ~ 17423418 (-)
G86010 NA other upstream 1676632 17547162 ~ 17552766 (-)

Expression


Co-expression Network