AMCG00021385 (slc25a14,LOC106567890,LOC107697362)


Basic Information

Item Value
gene id AMCG00021385
gene name slc25a14,LOC106567890,LOC107697362
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16222904 ~ 16232810 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021385
GAGCGGTTTCCGGTTTCGGCGCAATTCAGGTGCAATAGACGGCGAGGGGATCCTCCgccgtttttatttatttattattgccGTCGTGGTGGCTGTAATGGGGAATATAGTTCACTAACCAGCAGCTCCCTATTCGGCACAGGTCTGCAGCCGGTGGAGGCGGCTCCCAGCGAAATGGCCAATCTGAACTGGAAACCGTTCATCTACGGAGGGCTGGCCTCGATCGTGGCGGAGTTCGGCACCTTCCCGATCGACCTAACAAAGACGCGCCTGCAGGTGCAGGGCCAGGCGCACTACCAGGAGATCCGCTACAGAGGCATGTTCCACGCGCTGCTGCGCATCGGCCGCGAGGAGGGCGTGCTCGCGCTGTACTCGGGGATTTCCCCGGCGCTCTTGCGGCAGGCTTCTTACGGGACCATTAAGATTGGCACCTACCAGACCTTGAAGAGACTGTTCGTGAGCCGTCCTGAAGATGAGACCATGGTGATCAATGTGTTTTGTGGAGTCGTCTCGGGAGTCCTGTCATCCTCTATAGCCAATCCCACAGACGTGCTGAAGATCCGGATGCAGGCCCAGGGCAGCCTCCTGCAGGGCAGCATGATGGCAAACTTCATCGATATCTACCAGCAGGAGGGCACGCGCGGGCTGTGGAGGGGAGTCATCCCCACAGCGCAGAgggcagccattgtggtgggCGTAGAGCTTCCCGTCTATGACATCACCAAGAAACACCTCATCCTGTCCGGCATCATGGGTGACACCATCTACACACACTTCGTCTCCAGCTTCACATGTGGGCTGGCAGGGGCTCTGGCCTCGAACCCAGTGGACGTGGTACGGACACGCATGATGAACCAGCGTGTGCTTGCAGGCAACCCCCTGTACAAGGGCACACTGGACGGGCTGCTGCAGACCTGGCGCAATGAGGGCTTCTTTGCGCTCTACAAAGGATTCTGGCCCAACTGGCTGAGGCTCGGGCCCTGGAACATCATCTTCTTCATCACCTACGAGCAGTTGAAGAAGCTCCAGTTGTAGCTGTCTGGTGGACGCCCCACAGTGACGCCCGAGGGCTGGGAGGGGGGTGAAGTGGTGTGCTGCCCTCTGGCCCTCACCCACGCGCACTGCTCCAGACCTCCCCACGGCCCAGCCCCCGCTCTCGTTTCTATTTGTGTCTATCCGTACATACATGCAGTCCAGCTCgggatccatttatttattttaatatttatttgtcccccccacaccccctatacttgttttatttgcacTCCACTTCCCCCCCCtcgcttcctcctcctcctcctcctttcctTACCCTCTTGCGGCAGCTAAAACTTTGAGTTTATAGTAAGAAAGTGTTACTTGCCCTCTGCTTGAAGTTGCAGTTGTGTTTCATgcggagaggagagaggagaacgcggacactgttttttttttttttctcaaacgaGAGTGTTAACGATGCTGGATGCTGCAAGGCTTGGTTATCTAGATGATTTTATTGAtatgttttatcattatttatttaaatattttttgcagtggTGCCAATAGCCCCTACTGCTTActtgaaattgtgtgtgttggtgtgttcATGCTCGAACTGTGCATTCCCACCGGATGTTAATGCTAGGGTGCCTTCTGCAGACAAGTGTCTATGCCCCTTCGCTATGGTTTGTGCAGGGTTTTGCTGGAGCTGGCGCCCCCTACTGACCTTCCCTGGGCTTAACAGGTCCCTGCTCTACCCTGCTAGACTGACCTGGCGCTGTGGTTCGAGAATTCGTAGTTCCTTGCTCTGAAATGCGTCTCTTGTGgccacaacacactgacactctcactCATACACACTCGCACTCagtcacacacccacacacaactTTGACTGGAAATCAAAGTACTGAGGGCACAGCGCTGTGGCATAGGTGCTTCCCCCGAGTGCCAAATTATTGTCTGTCTTTTATTGTTTCAAAGTGTTTAGATCCATTGAGCAGAGGGTTGGAGGCTCGCAGTCGGGTCTGGCAGGCTTCTCGCCATTGCCAGTGTCGGCCTTAAGGGTCTTTCACACCAGACGCGGTGTGGCATTGCTGCATGGCAGATCCCATTGAAATAAAGGTAGACGAGAGCGCCGTGGCAGAGGGGTGGAGTTATATCTATAAGATAACTGTCCATACAATTCAAATCCATTTAAGTTTCAACTTGCAGAAGCCAATATAGTCCGAAAAGTGATGTGCTATTGAGCTTGATAAGGGAGGTTTTCAGAATTGCAGTTTGCTTCGATAATGGAAGAGTTAAAGAAACATTTGCTTGATATTATAATGtaagcaatattttaaaataataaaaaagtattatgtaGCCTCAAATGTTTCGTTCTGAAAGTGACAGAGCTGTGGTTAAATTGTAGACATCCTTACCTTAAATCATTCCTGGTTGCAATTCATAGTACAATTAAAgctcaatttaaataaatagcataatattattcatattaatgcaCCATGATGCTCTCTGACCATACCCAGCAAATGACACAGAACTCGCATATGtataacatatacaaataaatgtattataaacaaacacacaattggCTACATTAAGTTATTTTAGGTTATTTTGTAGGGGAGGAGTtagggtttaaaaatatttatgtaggtctctattttgtgtaaaataaaggtTAGGCTCTTCTCCCCTCTGATGTAATTTCATGATTTTTGCCTGGCAATCAAAAGTCATACTGCTTTGAAGAGCCTGCACACCGACTGCCCTGCCACGTCCGCTACGCGTTCGGTGTGAAAGCACCTTTACTGTTAttatgtcttttatttattaaaaaataatagcactttttttaaaccactaggtttttaataatttgcctGACTCTGGCAACGTCTGTGGCATGATCTGCTGTCACTGTCATGACTGTCTGAAGGAGAAAAGAACAAAGAGGAAAGCAAAGGAGTGTCTGTGGTGCCGTGCAGGACTGTGCTCTGGTAATGGGGTTTGCAGGTGTGCCCCTGACCTGGACACAGTGGCCACTAGTGCTGATCACTTGACaacatgtaaaatgtgtctttgttaTCACAGATGCAAAAGTGAGGggcttattgtttttattattattttttaattataattattttccatatttatttatttttacaaatcatACGGTTCATTCAGttccatttagatttttttttttttaatcatctttCTGGgagctgtttttacatttgacaaTTCAAGCTTCGACTGATCAAATCTGCGGAGGTTGCATTCAATATTTGAAGGACAGATATAAATTCTTCTGCTCAGATTTAATGCATGCAGCATTTCCGTAGTGCCGATGGGTGATGGATTTTGAAATCCAGTCACCCTAGCTGCAGTGACAGCGTAGGGGCTCCTGGATCGCTCTCAGGCTTTCATTTGCTGTGTTGGTGTTTCGTGGAGAGCCCCATTGTGCTCTTGATGTCACCCTTAACTGAAAAAACGAGACTCAACAGGTTTGTTCGCACGATCTGTACCACGTTCACATGcctttggtaaaaaaaaaaaaaaatgatggggGAAAAAGGTCTGGTacaagatttaatttgtttatttatgacacttatttttttgtatgtttacctCCTAAGTTCAAAGCGAATCACGTGAATACTAACAGAACCTAACAGGGTGCCAGCTATGCAGCACAAGAACGATCTTTCATCTTTGGGTCATAAGGAAACAAACTATTGGAGCCAAAGCTAAAATGACAGTCCAAGCCCTGTGTACATGATACATTGTTAAACACTTGATTGTCACTGCTGAACatgctttatttataaatctgattcatttaaattattattatagtcattattattattgcttatgATATGCTGGTCTGTTACTTCTTTGGTCAGTCAAgggaaatgtgttaaatttcaaatgcatttgcactTTTGTGTTGTATCCGTGGTGGttatgttgttaaaaaaaatgcatttcaaaataaaacaaatcaaagtatTGCAGCTCTTTAATTACAGCAATTAATTGGTTTCCCACAAGGAGCACAATCAGGCTTTTTAAAGGGTATGTGTACACTGCACTCTGAAATCTTACttcaatacatcaataaaaaaaaaaaa

Function

symbol description
slc25a14 Predicted to enable C4-dicarboxylate transmembrane transporter activity; antiporter activity; and sulfur compound transmembrane transporter activity. Predicted to be involved in anion transport. Predicted to act upstream of or within mitochondrial transport and transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brain; eye; heart; liver; and pleuroperitoneal region. Orthologous to several human genes including SLC25A14 (solute carrier family 25 member 14).

NR:

description
brain mitochondrial carrier protein 1 isoform X1

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15106 SLC25A14_30; solute carrier family 25 (mitochondrial carrier), member 14/30

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021385 True 4145 mRNA 0.45 9 16222904 16232810

Neighbor

gene id symbol gene type direction distance location
AMCG00021391 siah2,LOC108431284,LOC107732330,LOC107692789,LOC107697363,LOC105023934,LOC107587204 coding upstream 20533 16199945 ~ 16202371 (+)
AMCG00021390 siah2l,siah2,LOC102786130,LOC101471392 coding upstream 38099 16183823 ~ 16184805 (+)
AMCG00021380 NA coding upstream 41082 16176362 ~ 16181822 (+)
AMCG00021378 LOC108434851,LOC107742289 coding upstream 56744 16138851 ~ 16166160 (+)
AMCG00021377 rab38c,LOC103035037,LOC108427929,LOC107733499,LOC107673818,LOC108278910,LOC107579578 coding upstream 91646 16125521 ~ 16131258 (+)
AMCG00021386 NA coding downstream 23655 16256465 ~ 16270872 (+)
AMCG00021389 NA coding downstream 55944 16288754 ~ 16289608 (+)
AMCG00021395 LOC103355350,LOC107387146 coding downstream 185413 16418223 ~ 16434076 (+)
AMCG00021394 NA coding downstream 233897 16466707 ~ 16471856 (+)
AMCG00021397 NA coding downstream 241973 16474783 ~ 16499645 (+)
G85623 NA non-coding upstream 53018 16140523 ~ 16169886 (+)
G85552 NA non-coding upstream 300183 15920739 ~ 15922721 (+)
G85507 NA non-coding upstream 467472 15753082 ~ 15755432 (+)
G85497 NA non-coding upstream 646386 15575549 ~ 15576518 (+)
G85455 NA non-coding upstream 659987 15561745 ~ 15562917 (+)
G85674 NA non-coding downstream 56939 16289749 ~ 16292193 (+)
G85746 NA non-coding downstream 314847 16547657 ~ 16549345 (+)
G85757 NA non-coding downstream 336637 16569447 ~ 16569650 (+)
G85758 NA non-coding downstream 339383 16572193 ~ 16572868 (+)
G85760 NA non-coding downstream 351507 16584317 ~ 16584765 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 149283 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 790540 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2149779 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 2189347 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 2785496 13435307 ~ 13437408 (+)
G85764 LOC103366846,LOC106930986 other downstream 357371 16590181 ~ 16592973 (+)
G85787 NA other downstream 423834 16656644 ~ 16714038 (+)
G85869 NA other downstream 765067 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 1237515 17470325 ~ 17473396 (+)
G86121 NA other downstream 2015680 18248490 ~ 18249686 (+)

Expression


Co-expression Network