AMCG00021398


Basic Information

Item Value
gene id AMCG00021398
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16526063 ~ 16527195 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021398
ATGCCCGTGCGCCCGGGTATCTGTGTGACAGCAtgtccctgccccccccctcccgcAGCGTTCCTAGAGGAGAAGGATGCTCACTCTCTCCTCAGGCGGCTGCGGCGAGCGAACGGCTTCCTGGAGGAGCTGCGACAGGGCAACATCGAGCGCGAGTGTGTCGAGGAGAGCTGCAGCTTCGAGGAGGCCAAGGAGGTGTTCGAGAACAAGGAGCGCACGATGGAGTTCTGGAAGAATTACATCTACACGAGCGGCAGTAACACGGAGGCACGGGAGGGCGAGCGGGCCGAGGCCGTGTACATGGTGGTGCCACTACTGGGCGTGGCGCTGCTCATCGTCATCGCGCTCTTCATCATCTGGAGGTGCCAGCTGCAGAAGGCCACGCGGCGCCGGCCCACCTACTCCCAGAACCGGTACCTTGCCAGCCGGACCTCCCGCAGCCTGCCCCGCATCCTGGTGCACAGGGACCCCCCCCACGCCGTCTCCTCCACGGATGCCGGCCCGCCTGATCCCTGCGCCCgcggcggaggaggaggaggaggcggttGTCTGACAGTGGGGTCTGATGCCGGCTCCTGCCCCAACCCTGGCCCCCATGCCCTCCCCGGCCACAGCCTGTACGTCCAGGACTCTTCGGCCTCCATGGCCTCGCGCCTGTCCAGCGCCACGCCCCCGCCGTCCTATGAGGAGGTGACCGGACATGTGGAGAGCAGCAGCGACGAGAACACCGTCCCCTACAGCGACCCCCCTCCCAAGTATGACGAGATCGTCAAGCAGAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021398 True 783 mRNA 0.66 2 16526063 16527195

Neighbor

gene id symbol gene type direction distance location
AMCG00021405 NA coding upstream 5700 16518570 ~ 16520363 (+)
AMCG00021397 NA coding upstream 26418 16474783 ~ 16499645 (+)
AMCG00021394 NA coding upstream 54207 16466707 ~ 16471856 (+)
AMCG00021395 LOC103355350,LOC107387146 coding upstream 91987 16418223 ~ 16434076 (+)
AMCG00021389 NA coding upstream 236455 16288754 ~ 16289608 (+)
AMCG00021402 NA coding downstream 4753 16531948 ~ 16535816 (+)
AMCG00021400 cnga2,LOC103395327 coding downstream 14762 16541957 ~ 16545499 (+)
AMCG00021399 nup62,LOC100135786,LOC106603332 coding downstream 22838 16550033 ~ 16555645 (+)
AMCG00021401 NA coding downstream 29403 16556598 ~ 16561776 (+)
AMCG00021403 NA coding downstream 46733 16573928 ~ 16579544 (+)
G85674 NA non-coding upstream 233870 16289749 ~ 16292193 (+)
G85623 NA non-coding upstream 356177 16140523 ~ 16169886 (+)
G85552 NA non-coding upstream 603342 15920739 ~ 15922721 (+)
G85507 NA non-coding upstream 770631 15753082 ~ 15755432 (+)
G85497 NA non-coding upstream 949545 15575549 ~ 15576518 (+)
G85746 NA non-coding downstream 20462 16547657 ~ 16549345 (+)
G85757 NA non-coding downstream 42252 16569447 ~ 16569650 (+)
G85758 NA non-coding downstream 44998 16572193 ~ 16572868 (+)
G85760 NA non-coding downstream 57122 16584317 ~ 16584765 (+)
G85763 LOC105929187 non-coding downstream 59122 16586317 ~ 16589411 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 452442 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 1093699 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2452938 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 2492506 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 3088655 13435307 ~ 13437408 (+)
G85764 LOC103366846,LOC106930986 other downstream 62986 16590181 ~ 16592973 (+)
G85787 NA other downstream 129449 16656644 ~ 16714038 (+)
G85869 NA other downstream 470682 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 943130 17470325 ~ 17473396 (+)
G86121 NA other downstream 1721295 18248490 ~ 18249686 (+)

Expression


Co-expression Network