AMCG00021413


Basic Information

Item Value
gene id AMCG00021413
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16708394 ~ 16709440 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021413
ATGGTTAACGAAACCAATAACGGCAACAGCACAGAGTGCGAGAACATCGATGAGTTCCGCAACCAGGTGTACTCCACGGCATACTCCCTGATCACTGTCTTCGGCTTATTAGTCAACGAGAAGAAAGCCAAGATCGTCTGCATCTGCATCTGGGTCTTTATCTGCACCACCAGCTCCCCTTTCCTCATGTCAGGCACCTCCATCGACAGCAAGACCAACAAGACCAAGTGCTTCGAGCCCCCAGAGAAGCGGACGGGTGGCCTGCACAAGCTCATCACCCTCAACTACTTTTCCCTGGTGGTGGGCTTCGCTATCCCTTTCCTGGTCATCGTGGTATGCTACATCGGCATCATCCGCACCCTGTTGACGGGCTCCAACAGCAtgcaaaagcagaaaaacacgCGCACCAAGGCCATCCGCATGATCGTCATCGTCATGCTGGCCTTCCTGCTCAGCTTCATGCCCTACCACATCCAGCGCACCGTGCACCTGCACTTCCTGAACAGGAAAGGCCAGCCCTGCAGCGACGTCATCTACATGCAGAAGTCTGTTGTCATCACACTCTGTCTGGCGGCGGCCAACTCCTGCTTCGACCCCATGCTCTACTTCTTCTCAGGGGAAAACTTCCGCCGCCGCCTCTCCACCTTCCGCAAGACGTCTGTTAGTGTGGGGCCCATGCAGCGCCGCCACAAGGTGACCACAGCCCTGGGCAAAGACCAGCTGGAGGAAGACGTCAGCCTGCAGGGAGCCAACAGTAACTAG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004974 leukotriene receptor activity molecular_function

KEGG:

id description
K04322 CYSLTR1; cysteinyl leukotriene receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021413 True 762 mRNA 0.56 2 16708394 16709440

Neighbor

gene id symbol gene type direction distance location
AMCG00021409 LOC108443111 coding downstream 34218 16656644 ~ 16674176 (-)
AMCG00021410 LOC104920593,LOC104965768,LOC103366846 coding downstream 117785 16581562 ~ 16590609 (-)
AMCG00021411 vamp7 coding downstream 135900 16567139 ~ 16572494 (-)
AMCG00021404 NA coding downstream 158300 16545753 ~ 16550094 (-)
AMCG00021406 NA coding downstream 204015 16503741 ~ 16504379 (-)
AMCG00021414 NA coding upstream 11349 16720789 ~ 16732937 (-)
AMCG00021420 itm2a coding upstream 133323 16842763 ~ 16850257 (-)
AMCG00021422 chmp1b,LOC101476317 coding upstream 189936 16899376 ~ 16908983 (-)
AMCG00021428 NA coding upstream 285106 16994546 ~ 16995556 (-)
AMCG00021426 NA coding upstream 293929 17003369 ~ 17021275 (-)
G85771 NA non-coding downstream 142373 16565717 ~ 16566021 (-)
G85716 NA non-coding downstream 236635 16471552 ~ 16471759 (-)
G85658 pof1b non-coding downstream 441596 16179162 ~ 16266798 (-)
G85592 NA non-coding downstream 696692 16011231 ~ 16011702 (-)
G85590 NA non-coding downstream 707173 15993252 ~ 16001221 (-)
G85824 NA non-coding upstream 98366 16807806 ~ 16809320 (-)
G85837 NA non-coding upstream 113376 16822816 ~ 16823079 (-)
G85889 NA non-coding upstream 360404 17069844 ~ 17071130 (-)
G85904 NA non-coding upstream 377282 17086722 ~ 17087718 (-)
G85905 NA non-coding upstream 378493 17087933 ~ 17088835 (-)
AMCG00021412 NA other downstream 58454 16647139 ~ 16649940 (-)
AMCG00021387 NA other downstream 465739 16234317 ~ 16242655 (-)
AMCG00021304 NA other downstream 2637069 14057918 ~ 14071325 (-)
G85115 NA other downstream 2656497 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 2757350 13948307 ~ 13951044 (-)
AMCG00021435 hdx,LOC107572093 other upstream 576809 17286249 ~ 17303470 (-)
G85953 NA other upstream 710164 17419604 ~ 17423418 (-)
G86010 NA other upstream 837722 17547162 ~ 17552766 (-)
AMCG00021444 NA other upstream 871802 17581242 ~ 17585441 (-)
G86049 NA other upstream 1216659 17926099 ~ 17926708 (-)

Expression


Co-expression Network