AMCG00021415


Basic Information

Item Value
gene id AMCG00021415
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16754933 ~ 16756372 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021415
ATGCTCCCCGCAGACGGCATAGGCGTGATAAAGGGACTCTACACCGAACTGGCCTCCAACCACCAAACGAAGATGGTGGGCTTGTCCCCGGGGGGTTCGCAGTGGGACCCTCGCAGCACCCTGCGGAGATACCTGCTGCTGAAGTACCTGCAAGTGTTGGTGCTGCCGTCGGGTAACACTCTGGTGTCATCACTGGGCATGCTGGGCAGCATGTGCGCTGCTCTGTTGCTGCGCCTGCCCAGTGTGTCTCGCAAGGCCTCCACGGTGCTGCTCTCCCAGCTGGCCTGGGCAGACGGGCTGGTGCTGCTGTGCCGGGGGCTGGCCGCACTTCCAGTGGCGATGGAGGGCCTGGGTCAGGGCCTGCTGGCTGCCAACGGGCACGCCAGTCTCTTGTTCCTCAGCTGCCTCAGTCTGGAGGCCCTGCTGGTGACACTGTGCCCCGTGGAGTCTCGGGGGCTCCGCACTGCCAGCTTCGCCCGCCTGGCCAGCACTGTGATCTGGGTGGCTGTGCTGGGAGAGCTGGCGGTGCTGCAGGCTGCTGACTACCATGGCGATGAACTGGGCCCCACCTCACTGCCCGGGGAAGCCAGCCACCTGGCAAAGCTGGTGTTTCAGGTCTGTCAGCAAGTGGCACCCCTTCTCCGCATACTCTCCCATGGCCTGGGGGCAGCGCTGTGGCTCATAAACGCCTATGTGCACTATACTGTGTTCTATCATGCCCCACTGCGACGCACCTGCAGTTTCCACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021415 True 750 mRNA 0.64 2 16754933 16756372

Neighbor

gene id symbol gene type direction distance location
AMCG00021408 NA coding upstream 99047 16653440 ~ 16655886 (+)
AMCG00021407 LOC105927798,LOC100704732,LOC103366304,LOC102229095,LOC107386560,LOC101162152,LOC101061287 coding upstream 112446 16636355 ~ 16642487 (+)
AMCG00021403 NA coding upstream 175389 16573928 ~ 16579544 (+)
AMCG00021401 NA coding upstream 193157 16556598 ~ 16561776 (+)
AMCG00021399 nup62,LOC100135786,LOC106603332 coding upstream 199288 16550033 ~ 16555645 (+)
AMCG00021416 NA coding downstream 22210 16778582 ~ 16790852 (+)
AMCG00021417 NA coding downstream 41286 16797658 ~ 16806805 (+)
AMCG00021419 NA coding downstream 75910 16832282 ~ 16833265 (+)
AMCG00021418 tbx22,LOC103376188 coding downstream 119626 16875998 ~ 16884879 (+)
AMCG00021421 fam46d,LOC100149701,LOC107572331,LOC107674891,LOC107753211,LOC107688579,LOC107564205 coding downstream 166199 16922571 ~ 16929677 (+)
G85784 NA non-coding upstream 105085 16647139 ~ 16649848 (+)
G85766 NA non-coding upstream 158031 16596201 ~ 16596902 (+)
G85763 LOC105929187 non-coding upstream 165522 16586317 ~ 16589411 (+)
G85760 NA non-coding upstream 170168 16584317 ~ 16584765 (+)
G85758 NA non-coding upstream 182065 16572193 ~ 16572868 (+)
G85823 NA non-coding downstream 51434 16807806 ~ 16809314 (+)
G85876 NA non-coding downstream 280200 17036572 ~ 17042575 (+)
G85903 NA non-coding downstream 330380 17086752 ~ 17087794 (+)
G85941 NA non-coding downstream 541787 17298159 ~ 17298813 (+)
G85976 NA non-coding downstream 703121 17459493 ~ 17459941 (+)
G85787 NA other upstream 40895 16656644 ~ 16714038 (+)
G85764 LOC103366846,LOC106930986 other upstream 161960 16590181 ~ 16592973 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 681312 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 1322569 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2681808 14069330 ~ 14073125 (+)
G85869 NA other downstream 241505 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 713953 17470325 ~ 17473396 (+)
G86121 NA other downstream 1492118 18248490 ~ 18249686 (+)
AMCG00021472 NA other downstream 2290677 19047049 ~ 19055103 (+)
AMCG00021485 NA other downstream 2523393 19279765 ~ 19294779 (+)

Expression


Co-expression Network