AMCG00021425


Basic Information

Item Value
gene id AMCG00021425
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17035957 ~ 17042507 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021425
CTTAGCcgcacccctcccccccattcAACCACTGGGTTTAATGTTGCTGTGTGTTTACTACAGTATTTAGAAAAAAGGGGGACATTTGCCATTTACATGCTGTGAACTCTGAATTAAACCAgagatttttagttttaattttttaagaaGCCATTCAGGATCCTACCATGCCGAAGAGAAAGCAGCAACAGGGAACTGAAGGAGAGGCGAAGGAGGAGAAACCAGCACCTCCCAAACCTGAACCAAAACCGAAAAAGCCAGCAAAGaAAGAGAAAGCAGTGAATGACAAGAAGGAGGACAAGAAGACCAAGGGAAAGAAGGGAGGCAAGGCAGAGGGAGAAGCCAATGAGGAGAACCACTCTGAAAATGGAGACTCTAAGACCAATGAGGTGGAGACTCCCGAGGACTCTGAGGATAAAGAAGCCAAGTCTGAGTAGCGACACTGCCCTACCCCCCCACCGCCTCCCCTCCGCCTATCTCCTCCACACCCCTTCTCCCCTACCCCACTCTCCTCCCCTTCTCTTCTCCCCCCAGATTCCCCAATCTCTGTTGTGTGGTGTCCCCCCTCCTTGACATATTGTTATCAGAGGAATATTTTTATCAATGATTTTATAAATATCGGTACAGGTTTTTAGCACAAAAAAGCTAATTAAGTGGAAGACCTTGCAGTTCTGCAGCGTCCTATCAAGCGTCTGCAAAAAACTTAACAAAAAATGAGACGAACacaactgaaaaatgaaaaaaaaaatgggaagaaagcaaaagattttttttatgacattttgtGACTGTCCGTAGCTTGTGCTGGTGTAGGGAGGGAGTTTCAGGTGGTAGAATTGAACTGTGAGAGTTTTACTCCATTTCCCCTGCTCAGACGCCCGGCTAGGCTGGGCCCCCAGATCCTCTGTATGTGCAGTGAGTTgatctttgtctttgtttgttttattttaattttattttcttctttttaaatggaTGTTTGTAAGACAGAGGAATAATTACAACTGAAAACATTCCAGACAGATTTATGATGTGGGCtgactttttttaaaaccatgttgaaaattattttgataaaacaaagttaataaataaatacataaaataataatattaacttgTAGAAGGCGACAACatatgcagatttttttttttttttttaatcatgggataagagtttttttaaatgaaaattgaaCATCTATTGAAATATGCAGGTGTCTGTGCTACCCCACTATTTTAAGCAGTAAGTTCTGGATGtctcttaataaaataatccttGGAATTTTCCTCATTCTGTTTCAGatctggttatttattttttacaaacttCTCGTGCTTTCGGTGAACCCACAAAGAAAGTACACTTGAAACATCCTGCTCAAAACAGCTGATGCTCTCCATGTACGTTAATGTACACAACATTAGCATTATATCTCTGAAGGCGCATGTATGtgttgaatattatttaatttctggtTTCAGTAAATCCTATAAAATGGGCTTCAGACAGGCAGATCTGTAGGTGTAGTCTTGAATGCATGACTACCAGCTGgagctcgctctctctctgtctctcatactaaatctaattattttatcaAACCAATATTGTTTTAAGGTCCTTTACAACTGATGgcttcaaatattgttttttttaattgaaggtgCCCACTGTCTGTAATATTAGCCTGTACAGAAGTTGTTTAATTCATCCAGGTAATCCGCCCATCAACACATATTGAGTTAGTGTTACCTGAAGGAGTTGCATTGAAAGCCAGAGGGAGCAGCGGCCcctaataaacattttatgacCCCTGTAAAGATAATTTAAATCCTTTGAACTGTTCAATTCTCTTAGGTTGTGATATTGGgatatgaataaaaaatggaacatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021425 True 1899 mRNA 0.39 5 17035957 17042507

Neighbor

gene id symbol gene type direction distance location
AMCG00021427 NA coding downstream 12818 17022545 ~ 17023139 (-)
AMCG00021426 NA coding downstream 14682 17003369 ~ 17021275 (-)
AMCG00021428 NA coding downstream 40401 16994546 ~ 16995556 (-)
AMCG00021422 chmp1b,LOC101476317 coding downstream 126974 16899376 ~ 16908983 (-)
AMCG00021420 itm2a coding downstream 185700 16842763 ~ 16850257 (-)
AMCG00021432 rps6ka6,rps6kal,LOC103359561,LOC102207076 coding upstream 207125 17249632 ~ 17280801 (-)
AMCG00021437 NA coding upstream 414353 17456860 ~ 17475633 (-)
AMCG00021446 NA coding upstream 470055 17512562 ~ 17517667 (-)
AMCG00021445 NA coding upstream 475874 17518381 ~ 17539713 (-)
AMCG00021447 NA coding upstream 546031 17588538 ~ 17589461 (-)
G85837 NA non-coding downstream 212878 16822816 ~ 16823079 (-)
G85824 NA non-coding downstream 226637 16807806 ~ 16809320 (-)
G85802 NA non-coding downstream 278346 16691567 ~ 16757611 (-)
G85771 NA non-coding downstream 469936 16565717 ~ 16566021 (-)
G85716 NA non-coding downstream 564198 16471552 ~ 16471759 (-)
G85889 NA non-coding upstream 27337 17069844 ~ 17071130 (-)
G85904 NA non-coding upstream 44215 17086722 ~ 17087718 (-)
G85905 NA non-coding upstream 45426 17087933 ~ 17088835 (-)
G85909 NA non-coding upstream 85957 17128464 ~ 17128665 (-)
G85938 NA non-coding upstream 206460 17248967 ~ 17290861 (-)
AMCG00021412 NA other downstream 386017 16647139 ~ 16649940 (-)
AMCG00021387 NA other downstream 793302 16234317 ~ 16242655 (-)
AMCG00021304 NA other downstream 2964632 14057918 ~ 14071325 (-)
G85115 NA other downstream 2984060 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 3084913 13948307 ~ 13951044 (-)
AMCG00021435 hdx,LOC107572093 other upstream 243742 17286249 ~ 17303470 (-)
G85953 NA other upstream 377097 17419604 ~ 17423418 (-)
G86010 NA other upstream 504655 17547162 ~ 17552766 (-)
AMCG00021444 NA other upstream 538735 17581242 ~ 17585441 (-)
G86049 NA other upstream 883592 17926099 ~ 17926708 (-)

Expression


Co-expression Network