AMCG00021476 (LOC107584322)


Basic Information

Item Value
gene id AMCG00021476
gene name LOC107584322
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19058884 ~ 19073801 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021476
ATGCCAGGGCGGGACTACCAGGAATCGTCTCACCTGGAGCAGTTTGTGACGCGCTTCCTGCTGAAGGAGACGGCCAATCAGCTGCAGTCTCTTCAGAGCTCCCTGGAacaAGGGCCAGTGAAGCCAGAGGTGCTTTCAATTCAGTGGTCAGGAAAACGATCCAATCGACGACTTCAAAGGAATTACAGCTTATCTCCAAACAACCCCCTTTTCAACATCGTCAATTCAGGGCTGCAGGAGGAGGACAGCCAGTGGATGACCCAGATAAACAGACTCCAGAAGCTGATTGACAAGCTAGAAAAGAAGGAACTCAGGCTTGAGCCGGTGGAAGAAGAAGTCTTGGATGGGAGCAGCAAGTCTCGGCAGCTGTCAGTGCTGGAGGAGGAGCGGGAGGATTTCCGCCTGGCGCTCCGGCGCTACATTGAGGCTGCGAACTCACAGACTGGCTGCCTGCAcaTCGCGGTACAGAAGCTCTCCAGCGAATCTCGCTTCATTCTGTACGAGTTCTGGGAACACAGCAACATCTGGAAAAACCACCTGCAGACAAACTACAGCAAAACATTTCAGCGCAGCAACGTGGATTTCCTGGAGACTCCTGAGCTGATGACCACAATGCTAGTGCCAGCTTCATGGTGGGTTCTGAACAATAACTAG

Function

NR:

description
PREDICTED: N-terminal EF-hand calcium-binding protein 1-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021476 True 654 mRNA 0.53 9 19058884 19073801

Neighbor

gene id symbol gene type direction distance location
AMCG00021474 NA coding downstream 32801 18992724 ~ 19026083 (-)
AMCG00021470 nlgn3 coding downstream 249633 18797918 ~ 18809251 (-)
AMCG00021471 LOC106604239 coding downstream 286297 18762928 ~ 18772587 (-)
AMCG00021467 LOC107748936,LOC107689138,LOC107733406,LOC107663109 coding downstream 374463 18663223 ~ 18684421 (-)
AMCG00021469 NA coding downstream 450731 18595142 ~ 18608153 (-)
AMCG00021477 necab1,LOC107724363,LOC107702129 coding upstream 2180 19075981 ~ 19100225 (-)
AMCG00021482 NA coding upstream 150630 19224431 ~ 19231673 (-)
AMCG00021481 NA coding upstream 175093 19248894 ~ 19252262 (-)
AMCG00021489 NA coding upstream 222682 19296483 ~ 19296899 (-)
AMCG00021487 adam22,LOC107719137,LOC107714333 coding upstream 233556 19307357 ~ 19339518 (-)
G86253 NA non-coding downstream 52452 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 140353 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 247737 18750672 ~ 18811147 (-)
G86240 NA non-coding downstream 395755 18659298 ~ 18663129 (-)
G86222 NA non-coding downstream 427417 18592640 ~ 18631467 (-)
G86285 NA non-coding upstream 79204 19153005 ~ 19153285 (-)
G86324 NA non-coding upstream 184756 19258557 ~ 19258855 (-)
G86386 NA non-coding upstream 372616 19446417 ~ 19448494 (-)
G86474 NA non-coding upstream 826657 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 830195 19903996 ~ 19912403 (-)
G86241 NA other downstream 148976 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 809990 18241237 ~ 18248894 (-)
G86049 NA other downstream 1132176 17926099 ~ 17926708 (-)
AMCG00021444 NA other downstream 1473443 17581242 ~ 17585441 (-)
G86010 NA other downstream 1506118 17547162 ~ 17552766 (-)
AMCG00021483 NA other upstream 185633 19259434 ~ 19274440 (-)
G86327 NA other upstream 201553 19275354 ~ 19278023 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 372285 19446086 ~ 19468782 (-)
AMCG00021514 NA other upstream 1207351 20281152 ~ 20284979 (-)
G86600 NA other upstream 1255621 20329422 ~ 20335304 (-)

Expression


Co-expression Network