AMCG00021481


Basic Information

Item Value
gene id AMCG00021481
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19248894 ~ 19252262 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021481
ATGTGCCAGATAGCATCACCGTGTCTTTTTCCAGGAAACGGGCCCTCAGGAATCTGCCTATCGTATTTGCTCTCCGGATACAGACCCTACCTGGACGCAGCGGCGGCCCATCCCAACCCGGTCCTCTTCAGCAAACTGCAGGAGGCAAAGCACCTCTCGATCATCGATCAGGCAAGAAGGATTGGACAGTCACAGAGAGACCTGGAGTATCTCAGTGAGGGGCTGGAGGGCCGTTCCTCCAACCCCGTGGCCGTGCTGTTCGACACGCTGCTGCACCCGGACGCCGACTTCGGCCTGGAGTTCCCGTCGCCGCTGCAGTGGAGGCTGGAGCCACAGACGCATGTCCCCCACCTGGTTCTGGGCAAGGCCTGCCCCGGGGGCGCCTGGCACGCCATGGAGGGCTCCATGCTGACCATCAGCCTAGGGATTTGGATGGAGCTCCCAGGAGTCAATTACAGAGATCTAACTGGGAAGAGAAGAAGTGTGGCGAACGACCGCGCCACCCCTGAGGAGATCTCCTCCTACTACAAGAACTACGTGAAGCTGATGGGCCTGCAGAAGAACTTCGTGGACAACGCCTACGTCACCTCGGTGCTGAAGCTCCACAGGGACCATGGGGAGGCACTGGAGAGCGAGGCCGGCCGGGACGACAGCAGGGACCATGCCCAGGCTCTGGAGGACACGAGCAGCAGTCCCCTGGTGTTCCCTCAGGGCATCTGGGAGGTGAGAGGCTACCAGCGGGCGCAGGACGATTCGCCGGTGCCGTTCTGCCTCTTCGCGGAGAATGTGGTTCTGGCCACGGGGGCCTCGGACTCCCCAGTCCGGCTGGCGGTGGAAGGGGAGGACCTGCCCTTTGTGTTCCACAGCATTGCGGACTTGGGGGCCGCCATCAGCAAGCGTAGCCTGGGCCAGGGCTCCGACCCGGTGCTGATCGTGGGGGCTGGGCTGAGCGCCGCGGACGCCACCCTGTGCGCCTACAACAACAGCGTCTCCATCCTGCACGTCTTCCGCAAGCGTGTGGATGACTCCAGCCTGATCTTCCAGCAGCTGCCCAAGACGCTGTACCCCGAGTACCACAAGGTGTACCACATGATGTGCTCCCAGACCCACTCTGCTCCTGCCGGGCCCTTCCCGGACTACACCAGCTTCCCCGAGCACTGCGTTGTCTCCTTCCAGCCGGACATGAAGTGCATCCTGCAGAGTGCCAGCGACTTTAAGGTCTTCAAGATCTCCATGGCCCTGGTGCTGATCGGGACCCACCCCAACCTGTTCTTCCTGAAGGACCAGGGCCAGTACTTGGGCCTGGACCCCAGTAAGTCCATCTCCTGCAAACAGAACCCCATCGACATCCACCCCTTCACCTTCGAGTGCACCAAGGAGGCCAACCTCTTCGCCATGGGCCCGCTGGTGGGAGACAACTTCGTGCGCTTCCTGAAAGGAGGAGCCCTCGGCATCGCCAGCTGCTTAACGAAGCGCCTGCAGAAGAAGAAGGGCAGCCTGATCgcggatgggggtgggggggtgcgaGGACGAGAGGGCTTGGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021481 True 1548 mRNA 0.62 4 19248894 19252262

Neighbor

gene id symbol gene type direction distance location
AMCG00021482 NA coding downstream 17221 19224431 ~ 19231673 (-)
AMCG00021477 necab1,LOC107724363,LOC107702129 coding downstream 148669 19075981 ~ 19100225 (-)
AMCG00021476 LOC107584322 coding downstream 175093 19058884 ~ 19073801 (-)
AMCG00021474 NA coding downstream 222811 18992724 ~ 19026083 (-)
AMCG00021470 nlgn3 coding downstream 439643 18797918 ~ 18809251 (-)
AMCG00021489 NA coding upstream 44221 19296483 ~ 19296899 (-)
AMCG00021487 adam22,LOC107719137,LOC107714333 coding upstream 55095 19307357 ~ 19339518 (-)
AMCG00021490 NA coding upstream 92704 19344966 ~ 19354391 (-)
AMCG00021486 NA coding upstream 124149 19376411 ~ 19383956 (-)
AMCG00021494 NA coding upstream 140749 19393011 ~ 19409496 (-)
G86285 NA non-coding downstream 95609 19153005 ~ 19153285 (-)
G86253 NA non-coding downstream 242462 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 330363 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 437747 18750672 ~ 18811147 (-)
G86240 NA non-coding downstream 585765 18659298 ~ 18663129 (-)
G86324 NA non-coding upstream 6295 19258557 ~ 19258855 (-)
G86386 NA non-coding upstream 194155 19446417 ~ 19448494 (-)
G86474 NA non-coding upstream 648196 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 651734 19903996 ~ 19912403 (-)
G86477 NA non-coding upstream 660275 19912537 ~ 19918803 (-)
G86241 NA other downstream 338986 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 1000000 18241237 ~ 18248894 (-)
G86049 NA other downstream 1322186 17926099 ~ 17926708 (-)
AMCG00021444 NA other downstream 1663453 17581242 ~ 17585441 (-)
G86010 NA other downstream 1696128 17547162 ~ 17552766 (-)
AMCG00021483 NA other upstream 7172 19259434 ~ 19274440 (-)
G86327 NA other upstream 23092 19275354 ~ 19278023 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 193824 19446086 ~ 19468782 (-)
AMCG00021514 NA other upstream 1028890 20281152 ~ 20284979 (-)
G86600 NA other upstream 1077160 20329422 ~ 20335304 (-)

Expression


Co-expression Network