AMCG00021482


Basic Information

Item Value
gene id AMCG00021482
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19224431 ~ 19231673 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021482
aaaaacatggcGGCGGATCTGCTGCGGACGGTCTCGGCTCGCTCTCTTAAAAGTAGCTCTGTTTTTGCATCGTCCTTGAAATGTGTCCTGCGAGGAAAGTTCTTCAGCACGACCTCCAGGGCGGCGCTCCAGAGCAGCAAGGTTCCCCAGCACCTGTTTTTCCCTCCGACTGAAGGAATCATGCTGCCACCCGGGTCCTTCAGCAGCAAAGTGGCTCTCATCACCGGCGGGGGGACCGGGCTGGGGAAGGCCATGACGACCACCCTCTCTGCTCTGGGCGCCCAATGCGTCATTGCCAGCCGAAAGCTGGATGTTTTGAAGCAGACAGCCGAGGATATTTCCAAAGTGACAGGAAACAAGGTCCTCGCTGTGCAGTGCGACGTCAGAGACCCGCAGTCTGTGCAGGCAGCTGTAGCCAAGGTGGTCGAGCTCGCTGGCCTTCCTGATGTGGTGATAAATAACGCTGCAGGCAATTTCATCTCCCCCTCCGAGAACCTCTCGCCCAACGCCTGGAGAACCATAACTGACATCGTCCTGAACGGGACGGCCTACATCACCCTGGAGGTGGGGAAGCAGCTGATAAAAGCACAGAAGGTGAGACTCCCCAGTGCAGCGCTGTTAGAGTGCGTGggttcagtgttcagtgtccAGTGTCCCGGCGCTATGCTGCTGGCCCTGATGTTTGGGCCTGCTGTGTTCACAGGGGCAGCTTTCCTGGCCATCACCACCATCTATGCAGAGAGCGGCTCTGGCTTCGTGGTCCCCAGCGCTTCAGCCAAGGCCGGGGTGGAGGCCATGTGCAAGTCCCTTGCTGCAGAATGGGGGAGATATGGAATGAGATTTAATGTGATTCAGCCCGGGCCGGTAAAGACCAAGGGAGCCTTCAGTCGGCTGGACCCGGCCGGCATGTTCGAAGCAGACATGCTGGACAGGATTCCGGCGGGGCGGCTGGGCACCACCCAAGAGCTGGCCAACCTGGCTGCCTACCTGTGTCACGAAGGAGCAGTGGGCTGCTCTTGAGACACTGATCAGGAGTACCAAGGGATCTTAATCGCAGCGCCGCTCACAAGTCCGGATGACACAGCTAATTCCCACTGGAGATCCGTATCAATGTGATTCAGGTTTCCCCTTTTCATCAGTTTCAAAGACACTAGAGTGTGCTCAGGGCTCGTGGTCGGTTCAGGGTCTCCTCTCCATAGGATGTGACCTTGAGTTGTGTCCGTGGGATAGAGAGCTGTAACTTGATCTCATCTGGAGATGCGTTTAGTCTACGGGCTGCTCTCGTTTCAGAGCCACAAGACACAAATGCAGTTTATTATCTTGGAGATCTTTCTCATTCTCTTAATGGAAAGCAATCCCCACCATTTGGGTGCCTTCTAACAACCGCCGAAGCCTCTGATATTTCTCTTTAATTGTTCAAGGAGCTCAGGACAGTTCTGTGTAATGAAGGAGCACGAAAAGCTTCAACAACAAGTAACATTTTCCATGTTATGAAATGTATCTTTTGGTGCTGGGGTGAatgggaatatatatttttaattatgcttttaaCTGTGTTTAGATCCTTAATGATTTTGCATATCTTATGAAAATCCAAACAAATAACACTTGAATTAATCCACTAAATgtgcattaataaaaatatgatgttGCATCTAAAGACATTGGTGTGATAAAG

Function

GO: NA

KEGG:

id description
K13236 DECR1; 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021482 True 1678 mRNA 0.52 9 19224431 19231673

Neighbor

gene id symbol gene type direction distance location
AMCG00021477 necab1,LOC107724363,LOC107702129 coding downstream 124206 19075981 ~ 19100225 (-)
AMCG00021476 LOC107584322 coding downstream 150630 19058884 ~ 19073801 (-)
AMCG00021474 NA coding downstream 198348 18992724 ~ 19026083 (-)
AMCG00021470 nlgn3 coding downstream 415180 18797918 ~ 18809251 (-)
AMCG00021471 LOC106604239 coding downstream 451844 18762928 ~ 18772587 (-)
AMCG00021481 NA coding upstream 17221 19248894 ~ 19252262 (-)
AMCG00021489 NA coding upstream 64810 19296483 ~ 19296899 (-)
AMCG00021487 adam22,LOC107719137,LOC107714333 coding upstream 75684 19307357 ~ 19339518 (-)
AMCG00021490 NA coding upstream 113293 19344966 ~ 19354391 (-)
AMCG00021486 NA coding upstream 144738 19376411 ~ 19383956 (-)
G86285 NA non-coding downstream 71146 19153005 ~ 19153285 (-)
G86253 NA non-coding downstream 217999 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 305900 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 413284 18750672 ~ 18811147 (-)
G86240 NA non-coding downstream 561302 18659298 ~ 18663129 (-)
G86324 NA non-coding upstream 26884 19258557 ~ 19258855 (-)
G86386 NA non-coding upstream 214744 19446417 ~ 19448494 (-)
G86474 NA non-coding upstream 668785 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 672323 19903996 ~ 19912403 (-)
G86477 NA non-coding upstream 680864 19912537 ~ 19918803 (-)
G86241 NA other downstream 314523 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 975537 18241237 ~ 18248894 (-)
G86049 NA other downstream 1297723 17926099 ~ 17926708 (-)
AMCG00021444 NA other downstream 1638990 17581242 ~ 17585441 (-)
G86010 NA other downstream 1671665 17547162 ~ 17552766 (-)
AMCG00021483 NA other upstream 27761 19259434 ~ 19274440 (-)
G86327 NA other upstream 43681 19275354 ~ 19278023 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 214413 19446086 ~ 19468782 (-)
AMCG00021514 NA other upstream 1049479 20281152 ~ 20284979 (-)
G86600 NA other upstream 1097749 20329422 ~ 20335304 (-)

Expression


Co-expression Network