AMCG00021483


Basic Information

Item Value
gene id AMCG00021483
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19259434 ~ 19274440 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021483
ATGCGGCTGCTGCGGAGCGTGGCGGTCCTCGGGGACGAGCTGCTCACAGAGGACCTCAGCGACCAGGGCGCCATCGGCCAGCTGCTGGGTGAGGCCACGGGCACAGGCTCTGTCTGGACTCGCACCTGCAGCCGGGGCAGGGCAGGGGCAGCGCTAATTAAAGTGTACAGTTTAAGTCGTGCAAACCCTGACGTCACCCTGTGCAAAGTGACTGATATTGAGTGTGAGAAGCGGTGGGTCGGCACCATGTCCGGTCCAGAAGTGGCGACTAAACACAGCGAGGGGCCCGTCTTCAGACACACCGTCACCGACAGCGATCTGGGCATGCGTGAGagcTCTTTGAAGGAGAGGCATCTTTCTGTGCTGAAGAAAGTGGTGAAAAGAAACCAGAATGAGAAGGCCAGGGAGCATCCTGAATACACTCTGGTCATCTGTGACCTGCTCAAAATATGCAGTTTGCCATTTCTCAAAGAGAAGTCTTCAGACGAGAGCAGCTACGCCCAGATCGTGAAGGAGTGTCTCTCTCAGATGGGTTACCTGATGCGAGTTCCCAGTGCCGACGTCCGACTGCAGGTCTGTGACTCCATCGCAGCCTTTTATCATCCGAAGGCCCCCAGACAGCAGGTTGAAGGTCTCCATCCCACCTCTCCGAGCTACAAGCCCCAGATGGCGGAGGAGAGCGGCGTGGCCGAAACCCTGGTGCTGTCCCTGGCCCTGCTGGAGGAGCAGCCTGCGGTGCGGCTGCAGGTCCTCCGCGCTCTGCAGCTGCTGTCCAGCGCCTCAGCTCGGGAACACATGGCCATCCTGCACGGCAGCGGAGATGTTCCAGTCGAACGCAGTTCAGACAGCCGGGCTGATCCTCTCGTCTGTGAAGAGATGGACGAGCCAGTTGTGCACCTGAGCGCCACACAGGACTTCAGCTTCCCTCTCCTGCTGACCTGTGCTGTGCTCTTCTCCCTAGGACTCAACTGCAGCCTGATCCTGCGAGTGCGCGGAGCCAGCAAGATCTGCGCCCTGATGAACGAGCCGGACCCAAGCGGCCGGCTGCTGCGCCGCTGCACGGACGTCCTGGGGAACCTGCTGGAGCTCGGCAGCAAGGAGGAGGCCACGTCTCAGCTCAGCACCACCGACTGCTTCATACCCGCAGCTGCCctgcctgccctgccctgcctgacctgccctgccctgcctgtCCAGCCTGTCCAGCCTGTCCAGCCTGCCCTGCCCcatgccctgccctgccctgcagACCCGCagctgccctgccctgccctgcctgtCCAGCCTGCCCTGCCCCATGCCCTGCCCTGCAGACCCGCagctgccctgccctgcccacCACACCCGCACACACCTCTGGATGCCCGGCCAGGGAGTGCGTGCGgcggcagacacacacaagctaTCACATTATAG
>TU107753
CGCTTGTAGTAGCAACGCCAGGGATGTCTGCCGGTGAGGCGCCGCTGCTGCCggtttatttcatgttgtttttcatgaatAGGGGCAGCGCTAATTAAAGTGTACAGTTTAAGTCGTGCAAACCCTGACGTCACCCTGTGCAAAGTGACTGATATTGAGTGTGAGAAGCGGTGGGTCGGCACCATGTCCGGTCCAGAAGTGGCGACTAAACACAGCGAGGGGCCCGTCTTCAGACACACCGTCACCGACAGCGATCTGGGCATGCGTGAGCATGCTGCTCTGAAGCCGATTGATCTCAGTCGCATCATTAATCTTCTAGAAGACCCACTTGCAagcTCTTTGAAGGAGAGGCATCTTTCTGTGCTGAAGAAAGTGGTGAAAAGAAACCAGAATGGTTTTcTCCTTAAAGACCTGGTCCAAATATTTAAGATTCTGAATCTGTGTGCAGAGAAGGCCAGGGAGCATCCTGAATACACTCTGGTCATCTGTGACCTGCTCAAAATATGCAGTTTGCCATTTCTCAAAGAGAAGTCTTCAGACGAGAGCAGCTACGCCCAGATCGTGAAGGAGTGTCTCTCTCAGATGGGTTACCTGATGCGAGTTCCCAGTGCCGACGTCCGACTGCAGGTCTGTGACTCCATCGCAGCCTTTTATCATCCGAAGGCCCCCAGACAGCAGGTTGAAGGTCTCCATCCCACCTCTCCGAGCTACAAGCCCCAGATGGCGGAGGAGAGCGGCGTGGCCGAAACCCTGGTGCTGTCCCTGGCCCTGCTGGAGGAGCAGCCTGCGGTGCGGCTGCAGGTCCTCCGCGCTCTGCAGCTGCTGTCCAGCGCCTCAGGACTCAACTGCAGCCTGATCCTGCGAGTGCGCGGAGCCAGCAAGATCTGCGCCCTGATGAACGAGCCGGACCCAAGCGGCCGGCTGCTGCGCCGCTGCACGGACGTCCTGGGGAACCTGCTGGAGCTCGGCAGCAAGGAGGAGGCCACGTCTCAGCTCAGCACCACCGACTGCTTCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021483 True 1416 mRNA 0.63 9 19259434 19274440
TU107753 False 1017 TUCP 0.56 8 19260945 19267461

Neighbor

gene id symbol gene type direction distance location
AMCG00021481 NA coding downstream 7172 19248894 ~ 19252262 (-)
AMCG00021482 NA coding downstream 27761 19224431 ~ 19231673 (-)
AMCG00021477 necab1,LOC107724363,LOC107702129 coding downstream 159209 19075981 ~ 19100225 (-)
AMCG00021476 LOC107584322 coding downstream 185633 19058884 ~ 19073801 (-)
AMCG00021474 NA coding downstream 233351 18992724 ~ 19026083 (-)
AMCG00021489 NA coding upstream 22043 19296483 ~ 19296899 (-)
AMCG00021487 adam22,LOC107719137,LOC107714333 coding upstream 32917 19307357 ~ 19339518 (-)
AMCG00021490 NA coding upstream 70526 19344966 ~ 19354391 (-)
AMCG00021486 NA coding upstream 101971 19376411 ~ 19383956 (-)
AMCG00021494 NA coding upstream 118571 19393011 ~ 19409496 (-)
G86324 NA non-coding downstream 579 19258557 ~ 19258855 (-)
G86285 NA non-coding downstream 106149 19153005 ~ 19153285 (-)
G86253 NA non-coding downstream 253002 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 340903 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 448287 18750672 ~ 18811147 (-)
G86386 NA non-coding upstream 171977 19446417 ~ 19448494 (-)
G86474 NA non-coding upstream 626018 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 629556 19903996 ~ 19912403 (-)
G86477 NA non-coding upstream 638097 19912537 ~ 19918803 (-)
G86530 NA non-coding upstream 877780 20152220 ~ 20152767 (-)
G86241 NA other downstream 349526 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 1010540 18241237 ~ 18248894 (-)
G86049 NA other downstream 1332726 17926099 ~ 17926708 (-)
AMCG00021444 NA other downstream 1673993 17581242 ~ 17585441 (-)
G86010 NA other downstream 1706668 17547162 ~ 17552766 (-)
G86327 NA other upstream 914 19275354 ~ 19278023 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 171646 19446086 ~ 19468782 (-)
AMCG00021514 NA other upstream 1006712 20281152 ~ 20284979 (-)
G86600 NA other upstream 1054982 20329422 ~ 20335304 (-)
G86640 NA other upstream 1083861 20358301 ~ 20360255 (-)

Expression


Co-expression Network