AMCG00021486


Basic Information

Item Value
gene id AMCG00021486
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19376411 ~ 19383956 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021486
TGGACATTTTAGATGGACACTAAACACCCTGATAACTGTCCCGTCGGCAGCTGcgtatttcattgtgttttatatcGATCTACTGATGTGAAATAAAGCGCGGCACAGGGAAAACATCCCCAGTAGACGAACCCAAATCACGGAATCGGCAGAAGCGAAAGCCGAGCTGCACGGCGCTGGGGGATTCTGGGATACCCCGCAGCCGGAGCGGGAAAGAAGAAATCGCAAAGCTTGGGGAtcttattgtgtttgttttttgtgtttaattttcacCGGCGCGGgTCAATCCCAGAAAACTTCATCCCCCAGATGTGataattacttaaaatgaaacatcGAGATGTCTCTCAAGAGGCTGAAGTCAAGTTGCCAGAATCCAAGCCCTTCGACCATACGGAACAAAACAAGgtgaatttaaaaaggaaagcgAAGCCGGCGAATGAGTCTTCTGAGTTGATCAGCAGGCCTCTGGCTGGGAAAGCTTTTTATCTTGATCTGCCATTTGGGAAGAACACAGAATCCCTGGAGAAAGACATTCAGAAGCTGGGTGGGACCATCGAGAGGTTCTTCAGCAAGGACATTCGGTACCTGGTTTCTAACAAGAAGGAGGCAAAGTTTGCACAGTCACTGCGAAAGAACTCCCCTGTGCCGAGCCCGGGTTCGGCCCACAACGCCGGCCAGAGCTCACCGCGGCCCAACAGTCACCGGGGGAACCGCGAATGCTGCGCGCAGGGAGCAGGGGACTCGGCTGTGACGAGTCGAGGGAAGTCTCTGGTGGAGAAGGTCATCAAGGAACAGGAACTGATTCAGACCAACCGGATCCTGTCAAACGCGCTGGAATGGGGAGTCAAGATACTTTATGTTGATGACATCATCTCTTATATCGAAAAGCAGAAGAAGGATCTCCCTCCCGCTACATCCAACCTCTCTCTTAAGAAGACGgtcaAAACTGTAACGACTGACAGAGCTGCTCTGAAGAAGAATGAAGcTGGACGACTCAAGAAGCCGTTCGTGAAGGTGGAGGATCGAAGCAGACACTATCGGCCCGTCTACCAGTCGCTGCCCAACCTCCCAGAGTTCAACTTCCGGGTGCCAGTGCCTGGCTGTCCTTTTGACCTGGAGAAGAGCACCAAGGACAACAATGGGAAGATCAAACCAGGGGAAACCAGCAGCAGAGCCCCCAGACGAGGCGCCAGCGAGGCAGAGCGCGCCAGGAGGCTGAAGGCCCAGGTCAAGGCCCTGGACCTCCGAGACAAGAAGAGGAGAGGCTACTGCGAGTGCTGCCTGCTCAAATTCGAAGACGTGAAAGCACATCTCAAGAGTGAACATCATAAAGTGTTTTCCACCAGCGATGCATACGGCGTGGTGGACCAGCTGATCTCTGCCCTGGGGAATAACTTTGTTGAAATTCAGGAGAAGACAAGGCGAGTGACCCTCCCCCAGCGGACGCTCAGTTGTGCAGCTTCCCTGCCTGCCTCCTCAGCGGGAAGAAGCTCGGATGAGAGGGCGGAGAAGCGAGCAAGTGTGGAGGGAGGTGTGGAGGGTGGCTGTAAGAGGCACAGCGGGGGCTTGACGCGGCGGACCCCTGCGGCCGGGTCGTCCACGTCCTGCAGCGCAGCCAGCGTCGTCTGTATTGGTGGGCTGGGGCCGTCAGGGGACTCGAGGACGCGGACCGGACCGGTTCCTCCCGACCACCATGTGTTCGAGGTGCCGGGGGAGGTGCGCAGGTTCGACAGGGCTCAGCGGCTGATGAGGAAACGTTTACACAGGAGCTTGAGGGTGCAGAAGAGCGGCAGGATTCACGCCGAGCAGGAGCCACCCCCCAGCGAGAAACCACCCCCCCGCGAGAAACCACCCCCCCGCGAGAAACCACCCCCCCGCAGCGAGAAACCACTGCCCCGTGCCGCCAAGGTCTCCGAGGCCTGCTTCCACGTCTGCACGGCCGAACCAGACTGGGAGGATAGCGGCGGGCCCGGGGTGTGGGGGTGGACTGCGTGTGACGCTCTGGCTGGGTGTCTTGAAACTCCCTCCTGCAAACCTGAAACTACAGAGCCGGTGGAAGAGCAAACTGGCGAGCCGAGGGGGGCGCAGCTCCCAGACACCGGTCATGGGGAGGGTGCAGAGCCAGGGGAGGGCATGGCACTGAGCCGGACTCTatcactctctccccctcccgcCAAGATACAGCGCAAGGTCCGGCGCCTCAGGAGGAACAGGAAACGGCAGAAGGAGCAGCAGGCAGTGGAGGAGTGTGGTAAACACAACGCTGCTTCGTTGACAACGTCCCTGCAGGATCTGTGGCAGCTTTTCCAGTCCAGTGGAGACCCAGACTCGGAGTTCCTGGGGTTTCCAGACGGTGGCCTCTGAGGAACACACTCGGTTCTGTCACCTCATTCACTGTAGACCTGAACTGAGCTGCTCGATGCTGTTCAGACCCTTTTTGGCGTTTGTGTTCTCTGCACCATGGTTTGTTGGAGGAGGAGGGTATTGTTTTGGGTGTCAGTGTTTTAAAGGTTATACTTCAGTGATTTTTAATCGGTCACACAGCCTTCCCTGGACAGTGGAATTGCACCTCGTGGGGGGTCTCAGTTctcattattaatatgaaaagaTCTTCATAATAATGGATTTTAActtggaggtggggggggggggagaagcCACACATGAAATATTTAGGCTTGGAAACCTGGAACACACACTCTATTAGTGACAGTGCCGTCAGGTTTGTGACATCTGAGGTCAGTTTACAGACTCCATCCGCTCATCAATGCATTGACTGGAGTCACtattctgcattttaaagagatgttttatatgtatgtaaagcgtatgtaatgtgtaaatatatagttatttttctgaactaaaatattaaatgtttttaaaatagaatCTACTTTGTAATAAACACAGGTcagaattgtacattttgtaccTGACGGATATTAAAGACGTGTCAGATGATTTAATAA

Function

GO: NA

KEGG:

id description
K06629 ASK, DBF4; activator of S phase kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021486 True 2975 mRNA 0.54 13 19376411 19383956

Neighbor

gene id symbol gene type direction distance location
AMCG00021490 NA coding downstream 22020 19344966 ~ 19354391 (-)
AMCG00021487 adam22,LOC107719137,LOC107714333 coding downstream 36893 19307357 ~ 19339518 (-)
AMCG00021489 NA coding downstream 79512 19296483 ~ 19296899 (-)
AMCG00021481 NA coding downstream 124149 19248894 ~ 19252262 (-)
AMCG00021482 NA coding downstream 144738 19224431 ~ 19231673 (-)
AMCG00021494 NA coding upstream 9055 19393011 ~ 19409496 (-)
AMCG00021499 nmt2,LOC107738873,LOC107549229 coding upstream 88979 19472935 ~ 19482233 (-)
AMCG00021497 NA coding upstream 102672 19486628 ~ 19488734 (-)
AMCG00021500 NA coding upstream 116280 19500236 ~ 19503565 (-)
AMCG00021498 NA coding upstream 139572 19523528 ~ 19584960 (-)
G86324 NA non-coding downstream 117556 19258557 ~ 19258855 (-)
G86285 NA non-coding downstream 223126 19153005 ~ 19153285 (-)
G86253 NA non-coding downstream 369979 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 457880 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 565264 18750672 ~ 18811147 (-)
G86386 NA non-coding upstream 62461 19446417 ~ 19448494 (-)
G86474 NA non-coding upstream 516502 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 520040 19903996 ~ 19912403 (-)
G86477 NA non-coding upstream 528581 19912537 ~ 19918803 (-)
G86530 NA non-coding upstream 768264 20152220 ~ 20152767 (-)
G86327 NA other downstream 98388 19275354 ~ 19278023 (-)
AMCG00021483 NA other downstream 101971 19259434 ~ 19274440 (-)
G86241 NA other downstream 466503 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 1127517 18241237 ~ 18248894 (-)
G86049 NA other downstream 1449703 17926099 ~ 17926708 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 62130 19446086 ~ 19468782 (-)
AMCG00021514 NA other upstream 897196 20281152 ~ 20284979 (-)
G86600 NA other upstream 945466 20329422 ~ 20335304 (-)
G86640 NA other upstream 974345 20358301 ~ 20360255 (-)
G86649 NA other upstream 1011656 20395612 ~ 20397783 (-)

Expression


Co-expression Network