AMCG00021487 (adam22,LOC107719137,LOC107714333)


Basic Information

Item Value
gene id AMCG00021487
gene name adam22,LOC107719137,LOC107714333
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19307357 ~ 19339518 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021487
gGAAGATTTGCACATTCACATGATCTACAAATCTTCCGGTCTTGAGGCGCCACTGGATTTATTTTCATCTGatGTCCCCAAAACGGAAGGTCAGCCCCCCCCTGTTTTCAGGAGCGTCCATCGCCGCAGAAAGAGACAGGTGTCTCAGGTTCCTCACAGCGTTGAGGACGAAACCAAATACGTGGAGCTCATGATCATCAACGACCACCTGATGTACAAAAAGCATCGCCTGTCTGTTGGTCAGACTAATAACTACGCCAAGTCTGTCGTGAACATGGCTGATATAATTTTCAAGGAGCAGCTGAAGACCAGGATCATGCTTGTGGCCATGGAGACGTGGGCTGCAGACAACCGCTTCAACATCGACGACAACCCCCTTGTCACCCTACGCGAGTTCATGAAGTACAGGAGGGACTTCATCAAGGAGAAGTGCGACTCGGTCCACCTGTTCTCAGGGAACCGCTTTCACAGCAGCCAGGGGGGGGCCTCCTACCTGGGGGGCGTCTGCTCATTGACGAAGGGAGGTGGCGTTAACGAGTATGGAAAGGCAGATGAGATGGCGATTACACTGGCACAGTCCCTGGGGCAGAATATTGGCATTTTCTCAGACAGGAAGAAGATGATCAATGGGGAATGCAGGTGTGATGATAAATGGTCTGGATGCATCATGGAGGATGTTGGCTTTTACCTTCCCAAAAAGTTTTCACAGTGTAACATCGAGGAATACCACAATTTCCTCAATAGCGGAGGAGGGGCCTGCCTGTTCAACAAGCCCACCAAGCTGCTGGACCCTCCTGAGTGCGGCAACGGGTTTGTGGAGCCCGGAGAGGAGTGCGACTGCGGGACTCCAGCGGAGTGCAGTCTGGAGGGGGAGAGCTGCTGTAAGAAGTGCACACTCACGCAGGGGTCCAAGTGCAGCAACGGGCTGTGCTGCCGCAACTGCCAGATGGAGTACTTGGGCGTGGTCTGCCGGGGCGCCGTGAACGACTGCGACATCCCAGAGAATTGCACCGGTAACTCCAGCCAGTGTCCGCCAAATGTTCATAAAATGGATGGATACACCTGTGAAAAAGAGCAGGGGCGCTGCTTCAACGGAAAGTGCAAAACGAAAGACAGACAGTGCAAGTACATCTGGGGAGAGAaagCAACATCTGCAGACAAGTTCTGCTATGAAAAGCTGAACATCGAAGGGACTGAGAAGGGCAACTGTGGGAAAGACAAGGACACGTGGATTCAGTGCAACAAACAggACGTGCACTGTGGGTACCTGCTCTGCTCCAACATCTCCCCGTCGCCCCGCCTGGGCGAGCTCGTGGGCGGCCTGACGTCTTACTCGGTAGTCCAGCAAAGCGCCGCCTTAGACTGCAGCGGGGGCCACGTGATGATCGATGGCGACACGGACCTGGGCTACGTGGAGGACGGCACGGCCTGCGGCACCGACAAGATCTGCTTCAACCACCGGTGCCTCCCAGTGCAGGAGTTCAACTTCAGCACCTGCGCCGGCACCACAGACAAGAAGATCTGCTCCGGACATGGGgtctGCAGCAACGAGCTGAAGTGTGTTTGTCACTTGGGCTGGATGGGGGACGACTGCAACACAACCTCTCCCCTGAGCTACTTGGTTATCGGCCCAACGGTGACTGCGAACGGTGTCATTAGCACAAATATTATCATAGGCGCCATCGCTGGGACTATACTGGTGCTGGCTCTGATATTAGGAATCACAGCGTGGGGGTATAAACAAATCCCACCTGGAGACTATGTTAAAAAGCCAGGGGACGCGGACTCCTTCTATAGTGACATGCCTCCCGGAGTCAGTTCAAACTCTGCGACTAGCTCTAAGAAGAGGTCTGCCTATCTGTCCCATTTTCAGATCTATACGTGTTCCTTCACTCCATCCATCCCCTCCATTAGTCAGAACATTTCATTGTTTGGCATCAGGTCGAACGGCCTGTCGCACTCGTGGAGTGAGAGAATCCCTGATGCCAAACACATCTCCGACATCTGTGAAAACGGACGCCCCAGAAGTAACTCCTGGCAAGGGAATCTTGGAGGGAATCGGAAGAAACTGAAAGGGAAGAAATTCCGTCCGCGCTCCAACTCCACAGAGACTCTCTCTCCCGCCAAGTCGCCCACCTCCTCCACCGGCTCCATCGCCTCCAGCAGGAAGTACCCCTATCCCATGCCCCCCCTGCCTGACGAGGAGAGGAAAGCCAGCAGGCAGAGCGCCAGGCTGTGGGAGACGTCTATCTAAAACTCTTCTGACTCACTCAGCAACGACGTAAGAACTCAATTTTCTTCCGGTTTTATATgagagaaaactaaaacaatctaTGAAATGAACCGAGGGTTTCCTCCCCTGCCTGGGGTGGCTCTGGGGGCGCCTGCGTGGGAGAGCCGGCTGAGCGCGCGTCCGTCCCCTGCGCCTCCCAAGAGCACAACTTCAGACGGGACGGCGCCGCCCTATCCCAGGCCGCTCCCGACCTCACCCATGGGGACAAGCCTCGACACCAAGCAGACCACCGCCCTCCCACGCCCGACACCGCGCGCCCTCCTCCGTTCGCTGCTCCTCCTCCGCCACGCGACGCCCACAGGTCATTACAAGcaggatttatttaatatgttttgaagCACGCGATCACTGTAGAAAATCCACACTGTATGCATGACACTGTTTATCGACGATGCCTGTAGTGTAAGAGGACGCATGCGGGAGAAGGACACATGTAGGGACTGGAACTGGATCTGTATTTAAGCTTCTTGATAATCGGCTCTCATCCTCATCGCTGCGGCGGCTGCAGACCACGCCCATTCCCGTCCCGTGTGGCTTTCTTTCCAGCGCTCGTTTTTGTTCCGTCACATTggattgtaaatatgtatagatTGGAATTACatgcaagtttgttttttaaggatcTTTTAAAGATAGTTAGTTCTTCTCCTGTGAAAACCCTTAATCTGTCTCAGCCCGTTAGTTGAGCCACAGGTTATAACatgtttggggatttttttaaatgcattttattttactgtgtagCGTATCGAATACTAGACTCTTGTGCCCCCTCTTGCGGGGCAGTGACAAGGTTGTGCGTCTCTCTACACAATGCTGTTGCTGGGGTGTAAACTGCACTGACGCACAGCGGGGGCAGAAAGCTCTGTTTCAGCTCCGTCccaaacagcagcacagagacgAGGGCAGATCCAGACCGCTCCTCCCCGGACCCCCACTGTACTGCGACTGTAGAGACGTGTCGccctgcaacccccccccagCACTGAATTTTTCTGTGGAACAACATCACACGGGGTGAAGGGTTAtccttttacaaatatatatgtcattTTAGTTTCCTTTAAAAGGCCAGACATGGCTGAAGAGAACTGCTGCAGCGATCCCTGGAACGCACGGGAAACGCCTCGTCAGCTGGAGGCGGGAGGACAGGATCAGGTGAGCAGGTGGCAGGAGAGCAGCTCCTCTCCGCACTGAGCTCAAATGAATGTACACTGGAGAATGGGGTCGACTCACTGGAACACAACAATGTCTTAACTACAAATATGAAGTCTTCATTGAACTGAAAGCTGTGTTCATCTATATGAAATTGtacttgttttatatatttttaatgtaaatgatcAACATCTCCGTGATTGAATACTGATCAGGATCCTGTAGATTATTTTCTTTGATCATATGGTGCAGTTTATAGCCGTTAGACTTCATTAGCATTCACAGCGTTTTTAAAGTTGTGAACCAACATGTTCCCTCGTCATTTAAGTCGCAAAATTAGCTGACGTTTCACAGCATGTTCTGCAGGTTGTTTATCAAACAGTGCTGTGGTGTGGAGACGCAGAGACTGCTTTATATCTCACTCTGCTGATAAACGCGTCCCAGACGGGCATCGAACCCCTTCCCTGTAGATCTGCGTCCCCTCAGTCTTGCTTTGTCCTCCTTCAgtcctttcttttgttttccgtGGGCTCTGGTGCTACGCGCAGCACATCCTGTCTGCATTTGCATTCGCACGCGCCCGCCTCTCGCCCATTTCTCCTGCCATACGAGCAGCATCGTGTTCACGGCCCTTCtgctataaaaacaaactaataggAAGACCAAATAACCCAGTGCTTCCTAATTGGACTGAATATGAAGGGCACTCTAGCTTTACTATACCCCTGTTGCGTCCTCAATGTTAGAGACAGCGGTTGTCCCACATACAGATGTATACGAGTCCTTCAGTCATCTTCACGCTCCAGAAACACGGCCGGTGCAGTGTGCGTGTGCTGCTGCGCTGACGGGGACAGAACGGCACGGACGCGTTGGTGCTTTGCTAGACTTAGAAATATTTTCACAATTCACCATCGGCCAAAACCCCCGGCTTCCGCTGCCGTTCATCTGGGCTCTGTGTGAATGATTCTGCCAGTGGCTTCCCTCCTGCAACAACCCCGTTCCATCGAGGCCCGACCCGTCTTCTTTGAATGTATTAAGCAATTAAACGACGTCAGTCCACTGGCCTCTCACACCGTGCTCTTTCCAGAAGCGCCTGGACAGCCGGCCATCCTCCACCTGCCCAGCTCTGCTGCCTGCGTTTCCTGTGCGGTTTGGTCAACATGGTTTTCAACTGTAACCTCACAACTGCAGTCTTtcctgtactgtacatataataGAGTGACAATGTAAATCAATGCCCATGTTTTTCCTACAATATTAATATCATTcagtattgtaatatatttaataaaacatgaaacttTC

Function

symbol description
adam22 Predicted to enable metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of postsynaptic density membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 61. Orthologous to human ADAM22 (ADAM metallopeptidase domain 22).

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 22 isoform X1

GO: NA

KEGG:

id description
K16068 ADAM22; disintegrin and metalloproteinase domain-containing protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021487 True 4756 mRNA 0.52 24 19307357 19339518

Neighbor

gene id symbol gene type direction distance location
AMCG00021489 NA coding downstream 10458 19296483 ~ 19296899 (-)
AMCG00021481 NA coding downstream 55095 19248894 ~ 19252262 (-)
AMCG00021482 NA coding downstream 75684 19224431 ~ 19231673 (-)
AMCG00021477 necab1,LOC107724363,LOC107702129 coding downstream 207132 19075981 ~ 19100225 (-)
AMCG00021476 LOC107584322 coding downstream 233556 19058884 ~ 19073801 (-)
AMCG00021490 NA coding upstream 5448 19344966 ~ 19354391 (-)
AMCG00021486 NA coding upstream 36893 19376411 ~ 19383956 (-)
AMCG00021494 NA coding upstream 53493 19393011 ~ 19409496 (-)
AMCG00021499 nmt2,LOC107738873,LOC107549229 coding upstream 133417 19472935 ~ 19482233 (-)
AMCG00021497 NA coding upstream 147110 19486628 ~ 19488734 (-)
G86324 NA non-coding downstream 48502 19258557 ~ 19258855 (-)
G86285 NA non-coding downstream 154072 19153005 ~ 19153285 (-)
G86253 NA non-coding downstream 300925 19005616 ~ 19006432 (-)
G86249 NA non-coding downstream 388826 18918254 ~ 18918531 (-)
G86244 NA non-coding downstream 496210 18750672 ~ 18811147 (-)
G86386 NA non-coding upstream 106899 19446417 ~ 19448494 (-)
G86474 NA non-coding upstream 560940 19900458 ~ 19900836 (-)
G86472 NA non-coding upstream 564478 19903996 ~ 19912403 (-)
G86477 NA non-coding upstream 573019 19912537 ~ 19918803 (-)
G86530 NA non-coding upstream 812702 20152220 ~ 20152767 (-)
G86327 NA other downstream 29334 19275354 ~ 19278023 (-)
AMCG00021483 NA other downstream 32917 19259434 ~ 19274440 (-)
G86241 NA other downstream 397449 18821533 ~ 18909908 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other downstream 1058463 18241237 ~ 18248894 (-)
G86049 NA other downstream 1380649 17926099 ~ 17926708 (-)
AMCG00021495 acbd7,LOC106595206 other upstream 106568 19446086 ~ 19468782 (-)
AMCG00021514 NA other upstream 941634 20281152 ~ 20284979 (-)
G86600 NA other upstream 989904 20329422 ~ 20335304 (-)
G86640 NA other upstream 1018783 20358301 ~ 20360255 (-)
G86649 NA other upstream 1056094 20395612 ~ 20397783 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC110535866 gtpbp10 misc NC_048566.1 CM023220.2 15482391 ~ 15614954 (+)