AMCG00021496


Basic Information

Item Value
gene id AMCG00021496
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 19470241 ~ 19471029 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021496
ATGTCCGTGCGCAAGAAGAAGTCCATCCTGGTGAAGACCTCTCTGAACAGCCCCTACACCCAGGAGTGGGGCTCCCTGACGCGACGGAAACGGCGCTACATCCTGGACGTCCTGACAGAGAAGTTCACGCAGACCGGTCTGCAGAAGACGGAAGAGGCcaagaagaagaggaagtgGCGGAAGAGGAAAGCGCAGCCCGGGCAGGGAGAGGGCAGCAGCGGTCAGGCAAAGCAGGGCTGGACAGACCCGGCCCTCCGACAACAGCTGGCGATCGGGATCAATGAGGTGACGCGGTGCCTGGAGAGGAACGAGTTGGGACTGGTGCTGGTGTGTAAGTCTGCCAAGCCGCCCCACATGACCAGCCACCTGATCCCGCTGAGCCTAACCAGGCAGGTGCCAGCATGCCGGGTGCCCCGGCTCAGTGAGAACATGGCCACGGTGCTGGGGCTGAAGTGTGTGCTGGCGCTGGGCTTCAAGAGGGACTCCAAGGCCTTCGCAAACCAGGTCCGAGCCATCGTGCGCAAGGTGCCGCGCTGCCACGTGCCCTGGATGCCCCGGCCAGGTGGGTCGGCCACCGCCCTCGCCACTGACTCGGAGTCCCAGGAGAGCGCGTCCGAAGGGGAGCCGAGCCAGAGCCACAAGAGGAAGTTGGACGAGGTCCCCCAAGAGGCCAGCGAGCTCAGAACCCCCAAAGCACCACTCCTGCAGCCCCTCCGAGTCAGAAGGGTGGTCCCCAACCCCAAGAAGGTCCGCAAGCCCAAGCTGAAGGAGAAAAGCAAAGGGAAATAG

Function

GO: NA

KEGG:

id description
K14523 RPP38; ribonucleases P/MRP protein subunit RPP38

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021496 True 789 mRNA 0.64 1 19470241 19471029

Neighbor

gene id symbol gene type direction distance location
AMCG00021492 NA coding upstream 4664 19460464 ~ 19465577 (+)
AMCG00021493 NA coding upstream 23618 19422724 ~ 19446623 (+)
AMCG00021491 NA coding upstream 78487 19384029 ~ 19391754 (+)
AMCG00021488 NA coding upstream 127417 19341820 ~ 19342824 (+)
AMCG00021484 NA coding upstream 163117 19299536 ~ 19307124 (+)
AMCG00021501 NA coding downstream 143166 19614195 ~ 19622221 (+)
AMCG00021505 NA coding downstream 442503 19913532 ~ 19918822 (+)
AMCG00021506 NA coding downstream 466710 19937739 ~ 19945655 (+)
AMCG00021510 NA coding downstream 500944 19971973 ~ 19975104 (+)
AMCG00021507 NA coding downstream 504574 19975603 ~ 19982429 (+)
G86387 NA non-coding upstream 21134 19448729 ~ 19449107 (+)
G86367 NA non-coding upstream 75367 19392097 ~ 19394874 (+)
G86323 NA non-coding upstream 211386 19258458 ~ 19258855 (+)
G86309 NA non-coding upstream 243473 19224453 ~ 19226768 (+)
G86284 NA non-coding upstream 316959 19153015 ~ 19153282 (+)
G86419 NA non-coding downstream 114960 19585989 ~ 19587369 (+)
G86454 NA non-coding downstream 358787 19829816 ~ 19837813 (+)
G86455 NA non-coding downstream 381340 19852369 ~ 19894619 (+)
G86529 NA non-coding downstream 681216 20152245 ~ 20152766 (+)
G86536 NA non-coding downstream 734163 20205192 ~ 20205538 (+)
AMCG00021485 NA other upstream 175462 19279765 ~ 19294779 (+)
AMCG00021472 NA other upstream 415138 19047049 ~ 19055103 (+)
G86121 NA other upstream 1220555 18248490 ~ 18249686 (+)
AMCG00021441 NA other upstream 1996845 17470325 ~ 17473396 (+)
G85869 NA other upstream 2466110 16997877 ~ 17004131 (+)
G86407 NA other downstream 28771 19499800 ~ 19501242 (+)
G86601 NA other downstream 871581 20342610 ~ 20401249 (+)
AMCG00021517 gatad1 other downstream 897124 20368153 ~ 20371536 (+)
G86616 NA other downstream 907394 20378423 ~ 20380424 (+)
G86688 NA other downstream 1196441 20667470 ~ 20667927 (+)

Expression


Co-expression Network