AMCG00021533


Basic Information

Item Value
gene id AMCG00021533
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20689347 ~ 20693224 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021533
ATTTCTTTGGCTTCAACACAAAAGGGTGTCGCCACTGAGCTACAACCGCGAATTGGCCaacattgttttactttctttctgaTCCCCCGGGTAAAACCCCAGTGATGTAAAACCTCATGATTCAGGACTCGGAGAAAGACGGAGGAGCAGAAACCCAGTGACTCACCGGCCCGCCCCCGGCTCTGGCTATAAAACACTGTGGACACACACTGGTACGTCCTGCAAACTTTCCAATCGGGACTTCTGCACTGGGGCAGTTTTGTGCACCAATGGGTTCGTTTGCGCCGCTTTGCGTTACAGCTTTGCTGCTGCTGGTTCAAGTGTCTGCTCTGACACCGAAAGAGATGTGTCTGCTGCCGGTGGACGAGGGTCCCTGCCGGGCCTTGCTGCCCCGCTTCTACTACAACAGATACACGCAGCAGTGCGAGGAGTTCAGCTATGGGGGCTGCGGGGGCAACCCCAACAACTTCCCCACGTTTGAGGACTGCGAGAAGAGCTGCTGGAAGATCCCGAAGGTGCCTAAAGTGTGCCGGCTGGACATGGACGAGGGACAGTGCCGGGCGATCCTCAAGAGATACTTCTTCAATTTCACCTCCATGCAGTGTGAAGCTTTTGAGTACGGAGGCTGTCTGGGCAACGACAATCGCTTCATGGACAAAAAATCCTGCTCTGAGAAGTGCGAACCTCAGAAAAGTGTCCCCCTCCTCTGCCTGGATCCCCTGGACGCAGGCTCCTGCTCGGCGGCCCTGCCTCGCTATTACTACAACCAGAACTCCAAGTCCTGCGTTGAGTTCATCTACACGGGCTGTGgaggcaacaacaacaactttgtCGACCAGCAATCCTGCACTCGAGTCTGCATCAAAGGTACGTGGAGAAACGACATCCCCGACACTGACTTCAACCGAGGGGCCCGACCAGAGAACAGCCACGTCTTTCTGAGCCTTTGAGCGCCAGCGTGTGTCACGATACACAAATCCCTGGCTCTGCCGAAGCCTGTTTAAATAGAGGGGTGGCTACAAACATCCCAATTTAGATGtatgattataatttaaagATGAGTGCCCCAGATATACAGGCTAGACACATTAAAGCATGAAACCGGAGTGTCGATAATGTACAGTTTGTGGGATATGTCTACCCTGcctcatgttttttatttaataatgtgttcCAGGGAGAAAACTAAAGACTGACTTTCCCATAAGAAGGCTCATCAAGGTGAAACGAAAGAAAGTGAGCCCTTAAACTGGAGAGGATCGTTGTGTGCCGTGTGTCTGATGCCACACTAGCCCTCGGATGTTCCTGCTACTGTCTAATTTACAATGTcctattttgtttacattttgttttatatggttTTTATTTCTcgtttgtttcctttaaaaaagcatatttGCATAAATTGTCCTGAATTGTTCTACTGGACAATAACTGAGTACATTTCCACCACCCTGGGACTGCTGTTCTTGTATTATAgtgttttactgcattttcaCCTGCATTTGTCATGGTTATTGTTTAATTACGAGTATGTTTACATTAATTCTGTTCTTGAATGTCCACAGCAAATGTACAGAGTTAATGATCTGGGTGGAGAAAAACATCAGCAGCTTGCTTTCAAATTGCAATGTATTCTAGTTGAAAGGAAGCTCTAACAAAATGTGATAAAGTTGCAGGTGTCTATATGCCagaggttttaaaaaatgtcactACTAAATCtacaaaaaccacaaaacaaatttGTAGATGAATACTGTTTCTCCTTTCATCTTTGCGTAGAAGTGTTTAACTTTATTCAATCGGCGTTTCCTACCACCTTTTGGTATCTGCCACAATAAACAGAtagtgtttgattttgtttctgcattgtGCTGCTATTTTACATTGTGATTTGTATCGTGTTTAATATTTGTAGAGAATTGTTTGGTCACTGCTTTAGTCTTGGTCCATGTCTCCCGGGAGTAAAGGCATGACCGCGAACTAAGCTATCTAGTGCACCAtgcctgttattattttattactgcatttattttgtatgccaTGTGTTAATATTGAAACTGAGCTATACTTGTAATCACTAAAGACTGTTTATATACTAtatcttttgaaataaaatgttttattatatatacattccATTTGTAtcgtgtatattatatattgtctcattttttatcatatttatgTACTTTTAAGACATTGTAAACTTGTTTATTGTCCACAGCAACCCTAGAGTGCAATGATGGtaacaataaatgtttatgGAAACACAAAGTGCTTTCAAACTTTTC

Function

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K23087 TFPI2; tissue factor pathway inhibitor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021533 True 2294 mRNA 0.43 4 20689347 20693224

Neighbor

gene id symbol gene type direction distance location
AMCG00021531 calcr coding downstream 50391 20618070 ~ 20638956 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding downstream 229069 20444543 ~ 20460278 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding downstream 254296 20414530 ~ 20435051 (-)
AMCG00021524 fam133b coding downstream 276875 20402783 ~ 20412472 (-)
AMCG00021520 NA coding downstream 299903 20378423 ~ 20389444 (-)
AMCG00021538 sgce coding upstream 150439 20843663 ~ 20855774 (-)
AMCG00021545 NA coding upstream 205847 20899071 ~ 20902765 (-)
AMCG00021546 NA coding upstream 223459 20916683 ~ 20926715 (-)
AMCG00021549 NA coding upstream 290376 20983600 ~ 21020401 (-)
AMCG00021548 NA coding upstream 341639 21034863 ~ 21038425 (-)
G86689 NA non-coding downstream 75239 20612663 ~ 20614108 (-)
G86648 NA non-coding downstream 295141 20393044 ~ 20394206 (-)
G86639 NA non-coding downstream 332868 20355070 ~ 20356479 (-)
G86598 NA non-coding downstream 349605 20325693 ~ 20339742 (-)
G86530 NA non-coding downstream 536580 20152220 ~ 20152767 (-)
G86736 NA non-coding upstream 128408 20821632 ~ 20822603 (-)
G86738 NA non-coding upstream 129776 20823000 ~ 20823964 (-)
G86739 col1a2,LOC106570460 non-coding upstream 130798 20824022 ~ 20854294 (-)
G86740 NA non-coding upstream 135035 20828259 ~ 20830922 (-)
G86848 NA non-coding upstream 482482 21175706 ~ 21184318 (-)
G86649 NA other downstream 291564 20395612 ~ 20397783 (-)
G86640 NA other downstream 329092 20358301 ~ 20360255 (-)
G86600 NA other downstream 354043 20329422 ~ 20335304 (-)
AMCG00021514 NA other downstream 404368 20281152 ~ 20284979 (-)
AMCG00021495 acbd7,LOC106595206 other downstream 1220565 19446086 ~ 19468782 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other upstream 28660 20721884 ~ 20724880 (-)
G86808 NA other upstream 370634 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 973178 21666402 ~ 21671315 (-)
AMCG00021619 NA other upstream 2461963 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 2636101 23329325 ~ 23332968 (-)

Expression


Co-expression Network