AMCG00021544 (dync1i1,LOC102799504)


Basic Information

Item Value
gene id AMCG00021544
gene name dync1i1,LOC102799504
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20929804 ~ 20940208 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021544
ATGCCCCAGGAAACTGTTTTCAGGGATGCGCTGCTCCTCTCCATCCCTCTAGCAGGCCTCGAACAGCTCACGATGTCGGACAAAAGCGACCTGAAAGCCGAGCTGGAGCGCAAGAAGCAGCGGCTCGCCCAGATACgagaggagaagaagagaaaggaggaagagaggaagaagaaagagTCGGAGACGCAGCAGAAGACAGAGCAGGTGCCGGAGGACTCGGACCTGGACCGCAAGCGCCGGGAGACGGAGGCGCTGCTGCAGAGTATTGGCATTTCTCCAGAGCCCCCTTTAGtCCCAACCCCTATGTCTCCTTCTTCGAAATCAGTGAGCACGCCCAGCGAGGCCGGCAGCCAGGACTCGGTGGACTGCGGACCGGTGGGCAGGACCCTGCAGTGGGACACTGACCCCTCTGTTCTCCAGCTGCAATCAGACTCTGAGCTC

Function

symbol description
dync1i1 Predicted to enable dynein heavy chain binding activity and dynein light chain binding activity. Predicted to be involved in transport along microtubule. Predicted to be part of cytoplasmic dynein complex. Orthologous to human DYNC1I1 (dynein cytoplasmic 1 intermediate chain 1).

NR:

description
PREDICTED: cytoplasmic dynein 1 intermediate chain 1 isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021544 True 444 mRNA 0.60 5 20929804 20940208

Neighbor

gene id symbol gene type direction distance location
AMCG00021542 NA coding upstream 22018 20904388 ~ 20907786 (+)
AMCG00021540 NA coding upstream 31356 20890890 ~ 20898448 (+)
AMCG00021541 ppp1r9a,LOC107722146 coding upstream 43023 20875123 ~ 20886781 (+)
AMCG00021536 NA coding upstream 87380 20829853 ~ 20842424 (+)
AMCG00021537 col1a2,LOC107722140,LOC107667770,LOC107591591,LOC107731699 coding upstream 102513 20797698 ~ 20827291 (+)
AMCG00021543 dync1i1 coding downstream 17021 20957229 ~ 20980625 (+)
AMCG00021547 dlx6,LOC107670195,LOC107665661 coding downstream 137737 21077945 ~ 21080685 (+)
AMCG00021555 NA coding downstream 240594 21180802 ~ 21192757 (+)
AMCG00021556 NA coding downstream 252754 21192962 ~ 21194602 (+)
AMCG00021563 NA coding downstream 328995 21269203 ~ 21291092 (+)
G86727 NA non-coding upstream 26949 20901027 ~ 20902855 (+)
G86695 LOC103362787 non-coding upstream 227347 20699214 ~ 20702457 (+)
G86687 NA non-coding upstream 309083 20620506 ~ 20620721 (+)
G86685 NA non-coding upstream 315439 20612626 ~ 20614365 (+)
G86668 NA non-coding upstream 382394 20508508 ~ 20547410 (+)
G86800 NA non-coding downstream 94894 21035102 ~ 21038425 (+)
G86833 LOC107754811,LOC107672863,LOC107731557 non-coding downstream 231882 21172090 ~ 21175659 (+)
G86859 NA non-coding downstream 296893 21237101 ~ 21238163 (+)
G86884 NA non-coding downstream 355323 21295531 ~ 21297780 (+)
G86892 NA non-coding downstream 575825 21516033 ~ 21516243 (+)
AMCG00021539 pdk4,LOC107722149 other upstream 17802 20908817 ~ 20912002 (+)
G86688 NA other upstream 261877 20667470 ~ 20667927 (+)
G86601 NA other upstream 528555 20342610 ~ 20401249 (+)
G86616 NA other upstream 549380 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 558268 20368153 ~ 20371536 (+)
AMCG00021550 NA other downstream 158211 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 218416 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 289644 21229852 ~ 21232853 (+)
G86861 mios,LOC106605261,LOC106582151 other downstream 294862 21235070 ~ 21236080 (+)
AMCG00021560 NA other downstream 301458 21241666 ~ 21257189 (+)

Expression


Co-expression Network