AMCG00021545


Basic Information

Item Value
gene id AMCG00021545
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20899071 ~ 20902765 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021545
GGAGGGAGAAGCTCCGCAGGACAGACGGGACACGCACCATGGGGAGGCTCGCAGTGCTGGTCGCGGTGGCCGCAGGGCTGTTAGCGCTGTTTGGAGAGAGATTCGTGCATTTAAGGAAAAGGTTATTGGCTTCCAGAGAAATCCAACAAAATCATCTTCCCAACTGTGAGCTCATTAAAGGTCTTGATTACGGATCTGAAGACATCACCGTGCTGCCCAATGGCCTGGCTCTGATCAGCACGGGGTTGAAGTATCCTGGTACCCCCCACTTTTCCGAGGAACCTGGGAAGATCTATGTTCTGGACCTGCACGCGAATCATCTCAAACCAGTCGAGCTGAGGGTGAGCCGCGGGTTCGATCTGGATTCGTTCAATCCACATGGAATCAGCGTTTACATCGACGAGACGGATCACACGGTCTACCTGTTTGTGGTCAATCACCCTAACTCGGAGAGCACGGTGGAAAACTTCAGATACAACGAGGAGGACAACTCCATCGCTCACCTGAAAACCATCAAACACAAACTTCTTCATCATGTCAATGACATCGTGGCGGTCGGACCAGAGAGCTTCTATGCGACGAACGATCACTACTTTTCCCACGAGCTTCTGCGCGCTGTGGAGATGTTCCTGGATCTGCCCTGGTGCGACGTGATCTATTACACCCCCGAGGGAGTGCGGGAGGTGGCAGCGGGCTTTAACTCCGTCAACGGGATCAACATCTCCCCCGATAACAAGTACATCTATGTTGCGGATATTCTGGCCCAAACTATCCATGTGATGGAGATCCAGAAAGACAAGACCTTGACGTCTGTGAAGGCTGTCCAAGTGGGGTCCCTGCCTGACAATATCGAGGTGGACCGGGTCACCGGAGACGTGTGGCTGGGGTGCCACCCGAACGCTGCAAAAATGGCCCCCTATGATCCTCAAAATCCCCCTGGATCTGAGGTGATCCAGATTAAGCACATTCACTCGGAGACGCCTGAGGTGAGGCAGGTGTACGCGGACGACGGCAGCGTGATCCAGGGCTCGTCCATCGCCGTTGCCTACCAGGGGAGGCTGCTGATCGgctctgtgtttcacaaaatgctCATCTGTGATCTGGAATAGCTTTCTCTGTTCGGAGGGGTGGGGAATGACCTGTGAACGACCCGGCAATGTGAACGAAGGCCGGTGCTGCAGACTGGGACGTCGTGAGGACCTTGCTAACAGAACTGGTCGAGGTGGGGAGAATTGTGACGTGTGCCTTAAGGCTGCGATTACGGGAGACCCTGTGAGCCGTTTCTCTGCAAATAAAGCCATATCAAATCCTCAAcctgtgtttaattatatatatatatataaacacttatATTTTTCCTCCctcaatgtattttgtactcAGCGTAAATACACAACTTTAAACTCTGAGTgcatggtttgttttcaatggCTTTGCA

Function

GO: NA

KEGG:

id description
K01045 PON; arylesterase / paraoxonase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021545 True 1438 mRNA 0.52 9 20899071 20902765

Neighbor

gene id symbol gene type direction distance location
AMCG00021538 sgce coding downstream 43297 20843663 ~ 20855774 (-)
AMCG00021533 NA coding downstream 205847 20689347 ~ 20693224 (-)
AMCG00021531 calcr coding downstream 260115 20618070 ~ 20638956 (-)
AMCG00021525 cdk6,LOC107667775,LOC107558583,LOC107722162,LOC107567973 coding downstream 438793 20444543 ~ 20460278 (-)
AMCG00021523 cdk6,LOC106588946,LOC107567973,LOC107667775,LOC107558583 coding downstream 464020 20414530 ~ 20435051 (-)
AMCG00021546 NA coding upstream 13918 20916683 ~ 20926715 (-)
AMCG00021549 NA coding upstream 80835 20983600 ~ 21020401 (-)
AMCG00021548 NA coding upstream 132098 21034863 ~ 21038425 (-)
AMCG00021552 dlx5,LOC106570474 coding upstream 184110 21086875 ~ 21094522 (-)
AMCG00021553 NA coding upstream 206989 21109754 ~ 21140683 (-)
G86739 col1a2,LOC106570460 non-coding downstream 44777 20824022 ~ 20854294 (-)
G86740 NA non-coding downstream 68149 20828259 ~ 20830922 (-)
G86738 NA non-coding downstream 75107 20823000 ~ 20823964 (-)
G86736 NA non-coding downstream 76468 20821632 ~ 20822603 (-)
G86689 NA non-coding downstream 284963 20612663 ~ 20614108 (-)
G86848 NA non-coding upstream 272941 21175706 ~ 21184318 (-)
G86849 NA non-coding upstream 284003 21186768 ~ 21188838 (-)
G86850 NA non-coding upstream 287074 21189839 ~ 21190932 (-)
G86881 NA non-coding upstream 388608 21291373 ~ 21293903 (-)
G86893 NA non-coding upstream 613267 21516032 ~ 21516234 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 174191 20721884 ~ 20724880 (-)
G86649 NA other downstream 501288 20395612 ~ 20397783 (-)
G86640 NA other downstream 538816 20358301 ~ 20360255 (-)
G86600 NA other downstream 563767 20329422 ~ 20335304 (-)
AMCG00021514 NA other downstream 614092 20281152 ~ 20284979 (-)
G86808 NA other upstream 161093 21063858 ~ 21083570 (-)
AMCG00021569 NA other upstream 763637 21666402 ~ 21671315 (-)
AMCG00021619 NA other upstream 2252422 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 2426560 23329325 ~ 23332968 (-)
G87263 NA other upstream 2435486 23338251 ~ 23338484 (-)

Expression


Co-expression Network