Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00021547 |
| gene name | dlx6,LOC107670195,LOC107665661 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 21077945 ~ 21080685 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| dlx6 | Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including embryonic morphogenesis; positive regulation of epithelial cell proliferation; and roof of mouth development. Predicted to be located in nucleus. Predicted to be part of chromatin. |
| description |
|---|
| PREDICTED: homeobox protein DLX-6 |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| id | description |
|---|---|
| K09314 | DLX1_4_6; homeobox protein DLX1/4/6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00021547 | True | 753 | mRNA | 0.60 | 3 | 21077945 | 21080685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021543 | dync1i1 | coding | upstream | 97320 | 20957229 ~ 20980625 (+) |
| AMCG00021544 | dync1i1,LOC102799504 | coding | upstream | 137737 | 20929804 ~ 20940208 (+) |
| AMCG00021542 | NA | coding | upstream | 170159 | 20904388 ~ 20907786 (+) |
| AMCG00021540 | NA | coding | upstream | 179497 | 20890890 ~ 20898448 (+) |
| AMCG00021541 | ppp1r9a,LOC107722146 | coding | upstream | 191164 | 20875123 ~ 20886781 (+) |
| AMCG00021555 | NA | coding | downstream | 100117 | 21180802 ~ 21192757 (+) |
| AMCG00021556 | NA | coding | downstream | 112277 | 21192962 ~ 21194602 (+) |
| AMCG00021563 | NA | coding | downstream | 188518 | 21269203 ~ 21291092 (+) |
| AMCG00021565 | LOC108410782,LOC107670023,LOC107698976,LOC107722163,LOC107555956 | coding | downstream | 279483 | 21360168 ~ 21361602 (+) |
| AMCG00021566 | phf14,LOC107722156,LOC107698992 | coding | downstream | 493365 | 21574050 ~ 21605063 (+) |
| G86800 | NA | non-coding | upstream | 39520 | 21035102 ~ 21038425 (+) |
| G86727 | NA | non-coding | upstream | 175090 | 20901027 ~ 20902855 (+) |
| G86695 | LOC103362787 | non-coding | upstream | 375488 | 20699214 ~ 20702457 (+) |
| G86687 | NA | non-coding | upstream | 457224 | 20620506 ~ 20620721 (+) |
| G86685 | NA | non-coding | upstream | 463580 | 20612626 ~ 20614365 (+) |
| G86833 | LOC107754811,LOC107672863,LOC107731557 | non-coding | downstream | 91405 | 21172090 ~ 21175659 (+) |
| G86859 | NA | non-coding | downstream | 156416 | 21237101 ~ 21238163 (+) |
| G86884 | NA | non-coding | downstream | 214846 | 21295531 ~ 21297780 (+) |
| G86892 | NA | non-coding | downstream | 435348 | 21516033 ~ 21516243 (+) |
| G86905 | NA | non-coding | downstream | 557591 | 21638276 ~ 21638516 (+) |
| AMCG00021539 | pdk4,LOC107722149 | other | upstream | 165943 | 20908817 ~ 20912002 (+) |
| G86688 | NA | other | upstream | 410018 | 20667470 ~ 20667927 (+) |
| G86601 | NA | other | upstream | 676696 | 20342610 ~ 20401249 (+) |
| AMCG00021550 | NA | other | downstream | 17734 | 21098419 ~ 21109368 (+) |
| AMCG00021551 | NA | other | downstream | 77939 | 21158624 ~ 21165500 (+) |
| AMCG00021561 | LOC106582151,LOC105891776,LOC106605261 | other | downstream | 149167 | 21229852 ~ 21232853 (+) |
| G86861 | mios,LOC106605261,LOC106582151 | other | downstream | 154385 | 21235070 ~ 21236080 (+) |
| AMCG00021560 | NA | other | downstream | 160981 | 21241666 ~ 21257189 (+) |
