AMCG00021555


Basic Information

Item Value
gene id AMCG00021555
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 21180802 ~ 21192757 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021555
ATGCAGGAGGGGAGAACCCAGTGTGATGTCATCAGTGCCATCAGAGTGGGAGGAGAAGACAGACTGAAACAAAGCGGAGAGCTGGTCCGGACTCTGGGTCTCCGCAGTGGCGCTGGAGGTGCAGCAGCCTGCCGGGGAAAGCGCTCCCAGCCTCGGGaagTGTCCAACTGGGAAGTGCCAGCCATGACATCTCATAAAGAAACCTTGACTTTCAGCTGTGGACTGTTCATGggtttcacattattttttttatctatgAACTATGTACAGTGGGAACATATTTCCCCCCACTTCCTCGCAATAGCCAGCACACCTTGGACAGCAAATGGCAAACTCTCACTGTCGGACACAAATAACAGCACTCACTTCCGCCTGGATGAAGGGAACCATACTGTGGCAGAGGATCTGTACAGGAAAGTGCGTGTGCTGTGCTGGGTGATGACGGCTCCGCAGAACCTGGAGAAGAAGACGGCCCATGTCCGCGCCACCTGGAGCAAACGCTGCAACACGGTGCTCTTCATGAGCTCGGTGGAGGACGTGGACTTCCCCACGGTGGGGCTCAACGTCTCTGAGGGCCGGGACCAGCTCTACTGGAAGACCATCAAAGCCTTCCAGTACGTCTACGAGCACCATCTAGACGAGGTCGACTGGTTCATGAAAGCTGACGACGACACCTTCGTTCTGCTGGAAAATCTGCGCTATTTTCTCTCCAATTACAGCAGTGAGCAGCCCATCTACTTTGGCCACCGATTCAGTCCCTTCGTGAAGCAGGGCTACATGAGCGGGGGAGCCGGGTATGTCCTGAGCAAAGAGGCACTGAGGAGGTTTGTCGAGGGCTTCAGGACAGGACAGTGCACTCACTTCACGTCCACTGAAGATGTGGGCATGGGGACGTGCATGGAAGCCATGAAAGTTGAGGCTGGAGATACCAGAGATAAATATAAAAGGGAGTCATTTCAAGCGTTCTCCCCAGAGACTCACTTAATTAGAAAGCTGTATAAAAGGGAGCTGTGGTATACAAGTTACGACTATTACCATACAGAAAGTGGCCCGCAGTGCTGCTCCGATTTATCAATAACTTTTCACTATGTCGACACCAGCACGATGTATGAGCTGGAATACTACGCACATCACTTGCGTCCCTATGGGTACCAGTACAGATACAACCCTGACGCCTGAGGACAGGGACTGAGGGCAGGGGGGACAACATTATGGACAGACGAGAAGGATTTAAACAACATGGAAAGAGACAATGGAAAGGATGGTCACACTGCCACAGCTGTACAGATtgctttatttgaatatatatatatattgattgtgCTTTAAGTAAAACCAAAGAACACTGATAAGGGGGTTTAAAATGGTGTGGGATGTTGCAGGTGAGGATGGCAGGTAGACTGtgctgtgattattattatataaaaggattattaataaagattattttacggttttatctttctc

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021555 True 1467 mRNA 0.49 5 21180802 21192757

Neighbor

gene id symbol gene type direction distance location
AMCG00021547 dlx6,LOC107670195,LOC107665661 coding upstream 100117 21077945 ~ 21080685 (+)
AMCG00021543 dync1i1 coding upstream 200177 20957229 ~ 20980625 (+)
AMCG00021544 dync1i1,LOC102799504 coding upstream 240594 20929804 ~ 20940208 (+)
AMCG00021542 NA coding upstream 273016 20904388 ~ 20907786 (+)
AMCG00021540 NA coding upstream 282354 20890890 ~ 20898448 (+)
AMCG00021556 NA coding downstream 205 21192962 ~ 21194602 (+)
AMCG00021563 NA coding downstream 76446 21269203 ~ 21291092 (+)
AMCG00021565 LOC108410782,LOC107670023,LOC107698976,LOC107722163,LOC107555956 coding downstream 167411 21360168 ~ 21361602 (+)
AMCG00021566 phf14,LOC107722156,LOC107698992 coding downstream 381293 21574050 ~ 21605063 (+)
AMCG00021567 NA coding downstream 464785 21657542 ~ 21659873 (+)
G86833 LOC107754811,LOC107672863,LOC107731557 non-coding upstream 5143 21172090 ~ 21175659 (+)
G86800 NA non-coding upstream 142377 21035102 ~ 21038425 (+)
G86727 NA non-coding upstream 277947 20901027 ~ 20902855 (+)
G86695 LOC103362787 non-coding upstream 478345 20699214 ~ 20702457 (+)
G86687 NA non-coding upstream 560081 20620506 ~ 20620721 (+)
G86859 NA non-coding downstream 44344 21237101 ~ 21238163 (+)
G86884 NA non-coding downstream 102774 21295531 ~ 21297780 (+)
G86892 NA non-coding downstream 323276 21516033 ~ 21516243 (+)
G86905 NA non-coding downstream 445519 21638276 ~ 21638516 (+)
G87030 agr2 non-coding downstream 1110809 22303566 ~ 22306888 (+)
AMCG00021551 NA other upstream 15302 21158624 ~ 21165500 (+)
AMCG00021550 NA other upstream 71434 21098419 ~ 21109368 (+)
AMCG00021539 pdk4,LOC107722149 other upstream 268800 20908817 ~ 20912002 (+)
G86688 NA other upstream 512875 20667470 ~ 20667927 (+)
G86601 NA other upstream 779553 20342610 ~ 20401249 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 37095 21229852 ~ 21232853 (+)
G86861 mios,LOC106605261,LOC106582151 other downstream 42313 21235070 ~ 21236080 (+)
AMCG00021560 NA other downstream 48909 21241666 ~ 21257189 (+)
AMCG00021591 NA other downstream 1078114 22270871 ~ 22291141 (+)
AMCG00021602 NA other downstream 1504407 22697164 ~ 22711144 (+)

Expression


Co-expression Network