AMCG00021578


Basic Information

Item Value
gene id AMCG00021578
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22034860 ~ 22063539 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021578
ATGAAAGGTAACACAACGCCGCAGAGGGTCCCTAACCTCCCGCAGATGGAGCCGCCCGTGTCTGTGCAGCTGAAGGACATTGTCTGTTATCTGTCTCTGCTCGAGGGGGGGAGGCCAGAGGACAAGCTTGAGTTTATGTTTCGCCTCTATGACACGGATGGAAACGGATATCTGGATAGCTCGgAGCTAGAAAATATTATCACCCAAATGATGCATGTTGCAGAATATCTCGAGTGGGATGTCACCGAACTCAAACCTATTCTCCAAGAAATGATGGAGGAGATTGACTACGACCACGATGGCACAGTCTCCCTGCAGGAGTGGATACAGGGGGGGATGACCACCATTCCCTTACTTGTCCTGCTAGGGCTGGAAACAAACGTGAAGGACGATGGGCAGCACGTGATGCATCATTTCTGGGTTGAGGGCAACTGTCCAACAAAGTGTGACAAATGTCATAAAAACATTAAGTGTTACCAGGGATTGACTGGACTACACTGTGTTTGGTGCCAAATTACTCTTCACAATAAGTGTGCATCCCATGTGAAGCCTGAGTGTGACTGCGGGCCTCTGAAGGACCACATCCTGCCCCCAACCACCATCTGTCCAGTAGTGCTGGAACGGCAAGCGACAATAAAGAGGGACGGCTGTTCCCAGCAGACCCGATGGACGGGGGAGCGGGCGAAGATGCAGCGGGCCAACTCCGTCACGGTGGACGGGCAAGGACTGCAGATTACTACGATAGCGGGGACACACCCCCTCCTGGTGTTTGTGAATCCGAAGAGTGGAGGAAAGCAAGGTGAAAGAATATATAGAAAGTTCCAGTATCTCTTAAATCCCCGTCAGGTGTACAGTCTTGCTAAAAGTGGCCCAATGCCAGGGTTAAATTTCTTCCGAGATGTTCCGGATTTCCGAGTGCTGGCGTGCGGCGGTGACGGCACTGTGGGCTGGATCCTGGATTTCATAGGCTATGAAGGGGAAAGTTTGCTCAAAATCTTGAAAGATATAGAAAACAGCACTGAGGTCTTGCTAGACAGGTGGATGTTCGAGGTGATTCCTAACGACAAAGATGAGAAGGGTGACCCTGTGCCTTACAGCATCATCAACAACTACTTCTCCATCGGAGTGgatgCGTCGATTGCACACAGATTTCATATCATGAGGGAGAAACATCCGGAGAAGTTCAACAGCAGACGGCATTGTGTGACCCGGCCCAGCCAGCTGTCCGCGCCGGCGTTCCTGCGGCAGGAGCCAGGGCCTCTAGCTGCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021578 True 1272 mRNA 0.52 14 22034860 22063539

Neighbor

gene id symbol gene type direction distance location
AMCG00021580 LOC107586980 coding downstream 8656 22020985 ~ 22026204 (-)
AMCG00021576 dgkb coding downstream 22627 22001679 ~ 22012233 (-)
AMCG00021577 NA coding downstream 42791 21971289 ~ 21992069 (-)
AMCG00021572 NA coding downstream 179408 21836023 ~ 21855452 (-)
AMCG00021568 NA coding downstream 272953 21674291 ~ 21761907 (-)
AMCG00021579 dgkb,LOC103388989,LOC106582257 coding upstream 5 22063544 ~ 22066573 (-)
AMCG00021583 NA coding upstream 43468 22107007 ~ 22114674 (-)
AMCG00021582 NA coding upstream 63938 22127477 ~ 22132117 (-)
AMCG00021581 NA coding upstream 72245 22135784 ~ 22153433 (-)
AMCG00021587 NA coding upstream 137563 22201102 ~ 22226742 (-)
G86925 NA non-coding downstream 249726 21784876 ~ 21785134 (-)
G86893 NA non-coding downstream 518626 21516032 ~ 21516234 (-)
G86881 NA non-coding downstream 740957 21291373 ~ 21293903 (-)
G86850 NA non-coding downstream 843928 21189839 ~ 21190932 (-)
G86849 NA non-coding downstream 846022 21186768 ~ 21188838 (-)
G86997 NA non-coding upstream 67267 22130806 ~ 22188140 (-)
G87092 NA non-coding upstream 565060 22628599 ~ 22628891 (-)
G87116 NA non-coding upstream 627069 22690608 ~ 22690889 (-)
G87181 NA non-coding upstream 943855 23007394 ~ 23014782 (-)
G87193 NA non-coding upstream 1012095 23075634 ~ 23076015 (-)
AMCG00021569 NA other downstream 363545 21666402 ~ 21671315 (-)
G86808 NA other downstream 951290 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 1309980 20721884 ~ 20724880 (-)
G86649 NA other downstream 1637077 20395612 ~ 20397783 (-)
G86640 NA other downstream 1674605 20358301 ~ 20360255 (-)
AMCG00021619 NA other upstream 1091648 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 1265786 23329325 ~ 23332968 (-)
G87263 NA other upstream 1274712 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 1431486 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 2135997 24199536 ~ 24210205 (-)

Expression


Co-expression Network