AMCG00021579 (dgkb,LOC103388989,LOC106582257)


Basic Information

Item Value
gene id AMCG00021579
gene name dgkb,LOC103388989,LOC106582257
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22063544 ~ 22066573 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021579
ATGATCACCAAAGACTCAACCAAGAAGCTCAAAGATGTTCTTCAGGAGTTTCACGGAGACGGGGTGCTGGCGAAGTACAACCCTGAGGAGGAGATTGACTTTGAAGGCTTCAAACTGTTCATGAAGACATTCTTGGAAACGGAGCTCCCTGAGGACTTTTGCCAACATCTTTTTGTGTCATTTCGTAATAAGTTCTCCCACCCCAGCCCCTCCACGTCAGAAAAGACACGTGTACTGAGTAAGGAAAACCATTTCGAGACCAATTTCATGGCAACtGTCACCTACACAGACAACAATACATCCGTCACTtctgattatattttgtatttcaggtCTTAA

Function

symbol description
dgkb Predicted to enable diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Predicted to act upstream of or within phosphorylation and protein kinase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human DGKB (diacylglycerol kinase beta).

NR:

description
PREDICTED: diacylglycerol kinase beta isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021579 True 339 mRNA 0.44 4 22063544 22066573

Neighbor

gene id symbol gene type direction distance location
AMCG00021578 NA coding downstream 5 22034860 ~ 22063539 (-)
AMCG00021580 LOC107586980 coding downstream 37340 22020985 ~ 22026204 (-)
AMCG00021576 dgkb coding downstream 51311 22001679 ~ 22012233 (-)
AMCG00021577 NA coding downstream 71475 21971289 ~ 21992069 (-)
AMCG00021572 NA coding downstream 208092 21836023 ~ 21855452 (-)
AMCG00021583 NA coding upstream 40434 22107007 ~ 22114674 (-)
AMCG00021582 NA coding upstream 60904 22127477 ~ 22132117 (-)
AMCG00021581 NA coding upstream 69211 22135784 ~ 22153433 (-)
AMCG00021587 NA coding upstream 134529 22201102 ~ 22226742 (-)
AMCG00021586 sostdc1 coding upstream 161651 22228224 ~ 22231184 (-)
G86925 NA non-coding downstream 278410 21784876 ~ 21785134 (-)
G86893 NA non-coding downstream 547310 21516032 ~ 21516234 (-)
G86881 NA non-coding downstream 769641 21291373 ~ 21293903 (-)
G86850 NA non-coding downstream 872612 21189839 ~ 21190932 (-)
G86849 NA non-coding downstream 874706 21186768 ~ 21188838 (-)
G86997 NA non-coding upstream 64233 22130806 ~ 22188140 (-)
G87092 NA non-coding upstream 562026 22628599 ~ 22628891 (-)
G87116 NA non-coding upstream 624035 22690608 ~ 22690889 (-)
G87181 NA non-coding upstream 940821 23007394 ~ 23014782 (-)
G87193 NA non-coding upstream 1009061 23075634 ~ 23076015 (-)
AMCG00021569 NA other downstream 392229 21666402 ~ 21671315 (-)
G86808 NA other downstream 979974 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 1338664 20721884 ~ 20724880 (-)
G86649 NA other downstream 1665761 20395612 ~ 20397783 (-)
G86640 NA other downstream 1703289 20358301 ~ 20360255 (-)
AMCG00021619 NA other upstream 1088614 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 1262752 23329325 ~ 23332968 (-)
G87263 NA other upstream 1271678 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 1428452 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 2132963 24199536 ~ 24210205 (-)

Expression


Co-expression Network