AMCG00021587


Basic Information

Item Value
gene id AMCG00021587
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22201102 ~ 22226742 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021587
ATGGAAGCCGATAGAGAAGGTCTCCACAGGCCTACTGATCCCCAGTCTTTCCCTCTACGCGAGGCCGACTCGAGTGCCAGCTGCCCGGGGAGCGAGAGGCTGGATTTCCCGGTCGCGGTGGTGCTTCCGGCGGGAGGGTCCGGCGAAAGAACGGGACTAGCGACCCCGAAACAGTTTTGCACATTTCTAGGCAGGCCGTTGATCAGCTACACGATTCAAGCTTTCGAGAGAGTTACGTGGGTGAAAAACATTGTCATTGTGGTAGCAAATGAAAGTCTGGATTTGATGAAGAACATTATCCAGAAACACGGTCACAAGAAGGTAAAGGTGGTTCTCGGAGGCCCAACCAGACACAGATCCATTTTCAACGGGCTTCGGGTGTTCATGGAGAGCCAGGACGACTCCCAGCTCACAAAGCCAAAGGTTGTCGTCATCCACGATGCGGTTCGGCCTTTCATGGAGGAGGAATTTCTTCTTAAGATCGCAAATGCTGCCAAGGAGCACGGGGCAGCCGGAGCCATCCGCCCCCTTGTGTCCACCGTCATCGCCACGACATCAGAGGGCTACCTGGACCACTCTCTGGAGCGCACTAAATACAGGGCCAGCGAAATGCCACAGGCCTTCCTGTTCGACACCATATATCAGGCTTATCAGCAGTGCACCGAGTATGACTTTGAGTTTGGGACAGAGTGTCTGCACCTCGTGCTCCAGTACTGCGGCACCAACGCCAAACTGGTTGAGGGACCCCCCACCCTGTGGAAGGTGACCTACATACGTGATCTGTTCGCAGCTGAATCAATAATTAAGGAAAATCTATCCCAGAGAGCCTGTGTTATCACAGGTGTCCACCAAGAGGCTGTCCATTTGACTCACTGCCTTCAGAAGACATTAGCACGAAGCATGGTAGACACTGTATCGACGTGGCATGGAAGCGATGGATCCTCTCCCAGTACAGTGCTGGAGAACTACAATCtcatatatatatctGTAAATAGCTCTTCctttcatgaaataaataaattagtggaAACTATCGGAAATACAGCTCTGCCCGTGCTCTATCCAGTGGTTCTTATCATGATGCATTTGAGCTTGTCTGAATGTATGTCTTTCAGCAAGACCTGGGATGAGCTGAGCGCCATCAAGAAACTTGCAAAAGaagtgaaagagagaaatattttagtttatggACTGCTGCTTAATTACACTAAGAGCCCTGATGTTTACCTGATGGCTGTTTCCTCTCTGTCAGAGATGTTGAAGGAGGAATGTTGA

Function

GO: NA

KEGG:

id description
K21031 ISPD; D-ribitol-5-phosphate cytidylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021587 True 1275 mRNA 0.50 10 22201102 22226742

Neighbor

gene id symbol gene type direction distance location
AMCG00021581 NA coding downstream 47669 22135784 ~ 22153433 (-)
AMCG00021582 NA coding downstream 68985 22127477 ~ 22132117 (-)
AMCG00021583 NA coding downstream 86428 22107007 ~ 22114674 (-)
AMCG00021579 dgkb,LOC103388989,LOC106582257 coding downstream 134529 22063544 ~ 22066573 (-)
AMCG00021578 NA coding downstream 137563 22034860 ~ 22063539 (-)
AMCG00021586 sostdc1 coding upstream 1482 22228224 ~ 22231184 (-)
AMCG00021589 NA coding upstream 13958 22240700 ~ 22241688 (-)
AMCG00021588 ankmy2,LOC102794045 coding upstream 15487 22242229 ~ 22246802 (-)
AMCG00021592 agr2 coding upstream 76902 22303644 ~ 22306427 (-)
AMCG00021594 snx13 coding upstream 187522 22414264 ~ 22436882 (-)
G86997 NA non-coding downstream 12962 22130806 ~ 22188140 (-)
G86925 NA non-coding downstream 415968 21784876 ~ 21785134 (-)
G86893 NA non-coding downstream 684868 21516032 ~ 21516234 (-)
G86881 NA non-coding downstream 907199 21291373 ~ 21293903 (-)
G86850 NA non-coding downstream 1010170 21189839 ~ 21190932 (-)
G87092 NA non-coding upstream 401857 22628599 ~ 22628891 (-)
G87116 NA non-coding upstream 463866 22690608 ~ 22690889 (-)
G87181 NA non-coding upstream 780652 23007394 ~ 23014782 (-)
G87193 NA non-coding upstream 848892 23075634 ~ 23076015 (-)
G87203 NA non-coding upstream 862860 23089602 ~ 23091111 (-)
AMCG00021569 NA other downstream 529787 21666402 ~ 21671315 (-)
G86808 NA other downstream 1117532 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 1476222 20721884 ~ 20724880 (-)
G86649 NA other downstream 1803319 20395612 ~ 20397783 (-)
G86640 NA other downstream 1840847 20358301 ~ 20360255 (-)
AMCG00021619 NA other upstream 928445 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 1102583 23329325 ~ 23332968 (-)
G87263 NA other upstream 1111509 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 1268283 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 1972794 24199536 ~ 24210205 (-)

Expression


Co-expression Network