AMCG00021588 (ankmy2,LOC102794045)


Basic Information

Item Value
gene id AMCG00021588
gene name ankmy2,LOC102794045
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22242229 ~ 22246802 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021588
ATGTGTGCCATGCTTTTGCTGTGTGGTGCAGGTAATGTCCAGGAGGCTTCGAGGCTGCTGGGCTGCAAAGATGTCCGAGTCAACTGTTTGGATGAGTATGGGATGACCCCACTGATGCACGCAGCCTACAAGGGGAAGGCGGACATGTGCAAGCTGCTGCTTCAGCACGGCGCAGATGTGAACTGCAACCAGCACGAGCATGGCTACACAGCCCTGATGTTCGCCGGACTCTCTGGAAAGACGGACATCACTTGGATGATGCTCGAAGCCGGAGCAGAGACCGACGTCGTGAACTCGGTCGGCCGAACAGCTGCACAGATGGCAGCCTTTGTTGGCCAGCATGACTGTGTGACTGTCATCAACAACTTCTTCTCCCGAGAAAGACTGGAATATTATACGAAGCCTCAAGGTCTGGAGAAGGAGGCCAAGCTTCCCGCCAAGCTGGCCGGCCCCCTGCATAAGATCATCATGACGACAAACCTCAACCCGGTGAAGATCGTGATGCTGGTGAAAGAGAACCCTCTGCTGGCTGATGTGGAGGCCCTGGGAAAATGTTACAAGGTCATGGACCTGATCTGCGAGAAGTGTGTGAAGCAGCGGGAGATGAACGAAGTGCTGGCCATGAAGATGCACTACATCAGCTGCATCCTCCAGAAGTGCATCAGTTTCCTGAAGGAACGGGACGACAAGCTGGATGGACTCATAAAAAGCCTATTGAAAGGGCGAGAGAGCGATGGGTTTCCTTCATACCAGGAGAAGTTTATCCGAGAGTGCATCAGGAAGTTCCCCTACTGTGACGCCACACTCCTACAGCAGCTGGTCCGAAGCATCGCTCCTGTGGAGATTGTAGGTCGCACTTCTTTGCTGTGTTGA

Function

symbol description
ankmy2 Predicted to enable enzyme binding activity and metal ion binding activity. Predicted to be located in cilium.

NR:

description
PREDICTED: ankyrin repeat and MYND domain-containing protein 2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K24633 ANKMY2, ZMYND20, DAF25; ankyrin repeat and MYND domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021588 True 873 mRNA 0.54 6 22242229 22246802

Neighbor

gene id symbol gene type direction distance location
AMCG00021589 NA coding downstream 541 22240700 ~ 22241688 (-)
AMCG00021586 sostdc1 coding downstream 11045 22228224 ~ 22231184 (-)
AMCG00021587 NA coding downstream 15487 22201102 ~ 22226742 (-)
AMCG00021581 NA coding downstream 88796 22135784 ~ 22153433 (-)
AMCG00021582 NA coding downstream 110112 22127477 ~ 22132117 (-)
AMCG00021592 agr2 coding upstream 56842 22303644 ~ 22306427 (-)
AMCG00021594 snx13 coding upstream 167462 22414264 ~ 22436882 (-)
AMCG00021600 twist1 coding upstream 340531 22587333 ~ 22588802 (-)
AMCG00021601 ferd3l coding upstream 348828 22595630 ~ 22596109 (-)
AMCG00021598 NA coding upstream 387902 22634704 ~ 22638390 (-)
G86997 NA non-coding downstream 54089 22130806 ~ 22188140 (-)
G86925 NA non-coding downstream 457095 21784876 ~ 21785134 (-)
G86893 NA non-coding downstream 725995 21516032 ~ 21516234 (-)
G86881 NA non-coding downstream 948326 21291373 ~ 21293903 (-)
G86850 NA non-coding downstream 1051297 21189839 ~ 21190932 (-)
G87092 NA non-coding upstream 381797 22628599 ~ 22628891 (-)
G87116 NA non-coding upstream 443806 22690608 ~ 22690889 (-)
G87181 NA non-coding upstream 760592 23007394 ~ 23014782 (-)
G87193 NA non-coding upstream 828832 23075634 ~ 23076015 (-)
G87203 NA non-coding upstream 842800 23089602 ~ 23091111 (-)
AMCG00021569 NA other downstream 570914 21666402 ~ 21671315 (-)
G86808 NA other downstream 1158659 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 1517349 20721884 ~ 20724880 (-)
G86649 NA other downstream 1844446 20395612 ~ 20397783 (-)
G86640 NA other downstream 1881974 20358301 ~ 20360255 (-)
AMCG00021619 NA other upstream 908385 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 1082523 23329325 ~ 23332968 (-)
G87263 NA other upstream 1091449 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 1248223 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 1952734 24199536 ~ 24210205 (-)

Expression


Co-expression Network