AMCG00021610


Basic Information

Item Value
gene id AMCG00021610
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22947324 ~ 22956666 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021610
ATGTGGAACAGGAAACGTCTGCCAGTGGGGCCGGAGATCCCcatcccgctctctctctcttgctcgctcTCTTTCGCTTGCTCAACTGGGGAGCCTCGCACTTTCACTCTGAGCTCAGAGGATAACGCTGGCAGCCCGCTCACTGACTTGCTGGCGAACAAGGCTGCCCACACTTCAGTTAATTGGGAGCGCTCTGCTTCTTGCTGGTCTCGAAAGGTGGCCATGGCCTGGGATTGTGGATTAAAGTATCTCTTCCACCTCTCCCCAACTCTGCAGGCAGGGGGGGTCTGCGCAATCCGGGACAAGGAGGACCTCAGTGGCATCGAGATGGTCCAGAGGCTTGCCAAGGATGGGTGCCGGTTCCTGCAGACTCAGAACAGCAAAGTCACGGATAGGACCTCTGAGCCGCACAGTGACGAAGCAAGCCGAGTGCGTCTGAAGGAAAGAGGCCAAGATGTCCTGGTGCTTCAGAGGGTGTCGTCAGAGAGGCCGGCCCCCCCGGCATCAGCGGGAGgcgggagggaggaggagaaggacaGGAGGGAAATCCAGGCAGCAGCGCCACTAGCAGCCACCGCAGCAGCAGGAGAGACCAGCATCATGGGCAGCTCCCGGCTCGGGGCGTTGGACCTGTGCAAGTCAGTGCCAGCCGCCCTGGtcgaggaagaggaggacgaggaggggTCGGAGCACAgcgacagcagcagcagccgggGCGGGGGGACGGCCCTGCCGACATTTGACGTGCCTTACTTCCGATACATTGATGAGGagggcgaggaggaggaggagacggaggaggaggaggaggaggaggaggaggaagagtggAGCAGCAGTCGCTCCCTCTCCTCCACCGAGGAAGACTCACCCGACTCGTCCGTTGTGTCTGACAGGTACGTGGTGGTCTCCGGCACCCCCGAGAAGATCCTGGAGCACCTGCTGAGCGACCTGCGCTTGGACGAGAGCCAGGGACCCCCGAGCAAGGAGACGGGTGAGTTCCCACGCCGAGACGCTCTCCTCGCCCTTGTCTGGGAGTCAAAACTTCTCCCAGCCACCCGGTGA

Function

GO:

id name namespace
GO:0002040 sprouting angiogenesis biological_process
GO:0001525 angiogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021610 True 1065 mRNA 0.62 3 22947324 22956666

Neighbor

gene id symbol gene type direction distance location
AMCG00021609 NA coding downstream 10023 22916457 ~ 22937301 (-)
AMCG00021607 NA coding downstream 40285 22901585 ~ 22907039 (-)
AMCG00021603 sp8,sp8b,LOC101158882 coding downstream 222985 22722939 ~ 22724339 (-)
AMCG00021597 NA coding downstream 265185 22673543 ~ 22682139 (-)
AMCG00021599 tmem196,LOC107655099,LOC107571147,LOC107755951 coding downstream 298262 22644392 ~ 22649062 (-)
AMCG00021608 NA coding upstream 11004 22967670 ~ 22982532 (-)
AMCG00021616 LOC105905466,LOC102209663,LOC102295699 coding upstream 60992 23017658 ~ 23022801 (-)
AMCG00021615 fam126a,LOC107667581,LOC107570921 coding upstream 69646 23026312 ~ 23048843 (-)
AMCG00021614 NA coding upstream 104867 23061533 ~ 23067739 (-)
AMCG00021620 igf2bp3,LOC108273237 coding upstream 139814 23096480 ~ 23109751 (-)
G87116 NA non-coding downstream 256435 22690608 ~ 22690889 (-)
G87092 NA non-coding downstream 318433 22628599 ~ 22628891 (-)
G86997 NA non-coding downstream 759184 22130806 ~ 22188140 (-)
G86925 NA non-coding downstream 1162190 21784876 ~ 21785134 (-)
G86893 NA non-coding downstream 1431090 21516032 ~ 21516234 (-)
G87181 NA non-coding upstream 50728 23007394 ~ 23014782 (-)
G87193 NA non-coding upstream 118968 23075634 ~ 23076015 (-)
G87203 NA non-coding upstream 132936 23089602 ~ 23091111 (-)
G87218 NA non-coding upstream 136922 23093588 ~ 23106188 (-)
G87234 NA non-coding upstream 240915 23197581 ~ 23197843 (-)
AMCG00021569 NA other downstream 1276009 21666402 ~ 21671315 (-)
G86808 NA other downstream 1863754 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 2222444 20721884 ~ 20724880 (-)
G86649 NA other downstream 2549541 20395612 ~ 20397783 (-)
G86640 NA other downstream 2587069 20358301 ~ 20360255 (-)
AMCG00021619 NA other upstream 198521 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 372659 23329325 ~ 23332968 (-)
G87263 NA other upstream 381585 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 538359 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 1242870 24199536 ~ 24210205 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location