AMCG00021614


Basic Information

Item Value
gene id AMCG00021614
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23061533 ~ 23067739 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021614
TCGCAGGCAGGTGTCTGATTGCTTAATGAAAGTGAGCGAAAGTTGTTCCTTTTCCAGCGGTCTCATGACTCTGACGTCATGCGAAAGGCTTCAATAGAGAATGTTGAGATTTAGAATCTCTGTTTCTAATCGTTCGGCCCTTGTCGGTtcccattaaaattaaaatgtctttcgTGTTTTGCTGTTGCTCGTGTCCGGCTCATTCGGATGAAACTCATGTTTCAGAGGGTCCCACCGAAAGGCAGCCCTTGCTTCAGCCCCAGTCGGCAAGGCAGTTTGGCCGAGCGAAGGAAGATGGAAGGAAACGACGTGGAAGATTTCTTTCCAAGGTCACCGGAGTGCCTGAGCTCGATCGGCGCTTTACCGATATCGCCGACACGTTTAATCGCCAGCAGGAACAGTATGAAGCCATGACTGCCTGCGTTAGCCAATTAAAAGAGAGCTGTCAATGTAAAGCGGCGAACACGCTCTCAGACTGCCTGGGGAAAATGAAGGAAGACCAAGGCAACTATAACATCGGCATTGAGATGAAGGGCTACGACTTCTCCCTTGTCGTTCAGCCCGATGGGTTTCCTGCTGAGCTGCAGCAGGCCCAGGCCCAGGTCCAGATCCTCTGCAAGGCGTGCAAATCCACCCTGGCGGCTGGTACCAAACTGCAGGAGATGGTGAACTCGGTGCTGCAGAACCAGTTGGACCTCCTGCAGGCCGTGAAGGAGGCCCACCAGTCCCACCAGGAGCAGGTGCGTTTGGAGGCCAATCTCCAGGAGAACCTGGAGGAGACCAGGAGAGTGCAGCAGCTCGCCACGCAGTACAGGGACGAGGCCAGCGCTCTGCTCAGGGAGGTGGCACTCCTCGCTGGCATCGCCCTCTGAGTTAACAAGAATAAGACCACTTTTTACGTTATGATATATGAATATTGGCTCTTTTTCTAATGAGATAATAGAAAATCTGATCTGGTTTTTCAcagtttctgtctttctttacaCTGGCAAATCCCACAGGCTTGAATTCCAGTGagctctttctttttaattaatagctGACATTAATTCAGCTGCTCCATTCAAAAGAAATTGTGCACTTGAAGGTATTGGCCAGAGCTGGTGTTTTCTTCAAGGTATGCCACATTGACAAATGCATCCCACACTGCTTTTCAGACTTTCCAGAAAATGTCACCCAGATCCTGGCAAGTAAAATATGTTTCTAGGCGCGGGGAAATGAAAGGACTCTTACTGCCTCTTGTGTGCCTTTCATTGCCAGATTGAAAGTAGGTGTTTTCTAAATGGGAGCAGGTTCTCTTTTCATCGCTACAGACCCTTTGTGTGCCACCTTAGGAATGTTACACAGGAACCTCTGCATTATTCAACACCGGATGTTTTTGTGGGACTGAACAGTAAACATAAAAGGGTAGATCAGTATAGGGAATAAAATGCAAGAGGACCTATTTGTTCCACACTCATCCATCTCAATTCAGAATTCAGTTCCTTGTGAgggaacaatatatatatatatatatttttttttgttttttttgttttttgtttttctctctcagtttttcttcttccagaaTGAGCTGTGAATTGTGTTACTGTTATTTCTGTTCTCTGCTGTAGTCAGAATATAGAATTACTGGAAAAACATCTCCCTTAATATGGCTACACATTATTCCTACCTTCATGCGGCTTTAAACTAAGCCCTGGTGTAGCCGGCTTCCCTGCAGGCATTAAGCTCCTCTAGATACACATCAACAAACATGGCCGTCATTTTGTATTCTAGTAACACTGCTGGAGAGAACATTACACAGCCTGCTAGGACCTGAGAAAATGGCGTGAAATTTGTAATGTAGCGGGAGGGAGAGctgcaagttttgtttttgtttttttctgaatgtgCTACCAAAACATAGCTGGCAGCATTGTTCTGTCCTCAATGGTGACCTAAATTGGATTTGACAGAGTAAAGGTTGTGGTTGGGGGCTCATTGACTACAGCTTTGGCAATTGGCTCCAGAATACTAGAGCTGAGACAACAAAATTGTGGAATGGATGTTTCATACATTTCACTgccttgtttttcattaattgcAAGTCTAGCTGGCAACTGTGTGTGAGCACTTTAAACTGTGACTCCCATAAGAGAGAGAATATCTGGAATGAAGGATTGGAAAGGAAATTGTTTTTGCAGCGTATTGTGTCATTGTTGAGGCAAGTTCAGTGTTACTTgtctttttcttaaacatcttTGTATTTGAaggattcattcatttatttgtggaGTTATACCACCTCTACTTACAGTGCCTTTCCTGAattgaatgttttgttgttgttgtttattttcctcttgttttatattttctgctcGGGCACAGAGCCACAAGAACTGTATATTGAGATTTACCGTTTGTTGTTAACtaaattaaaagttaatataaatgtaaagtttATATTGCTCAAAGAACATACGAATCGCAGTTGTGATGCCACAGCTCTGATGGGTGAATTCATATGGCAGCATTTTCGCAGAAGCTCTGTAATGAATGAAAGCTTCTGTTGATGCACAACATACAGTTACATAAAGGCACAACTAAAAGTACTTTATAATTCTGTTTATATTTCAAGCTATTATATATATGCTTATAAAATAACTAATGTACTTGCTGTTTCTTACTGTACATAACACAAATACTATGCCTGTGATATTTGTCATTGcagacataataataaataaaaaataataataagtgccAAGAGATAAATAacacttataataataattataataaatggaGCCTCTGTAGGGAAGGCTGTAATACTGAGAGGCAAAGAAGAATATTGCaaactgtgaaaatataattaatatcattaattcaatttcaGTACTAATAAACCTAAagcatttattatgttttatctttAAACTCAATGGATGTTATGCACTTTTTGTCAAACAACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021614 True 2958 mRNA 0.41 4 23061533 23067739

Neighbor

gene id symbol gene type direction distance location
AMCG00021615 fam126a,LOC107667581,LOC107570921 coding downstream 12690 23026312 ~ 23048843 (-)
AMCG00021616 LOC105905466,LOC102209663,LOC102295699 coding downstream 38732 23017658 ~ 23022801 (-)
AMCG00021608 NA coding downstream 79001 22967670 ~ 22982532 (-)
AMCG00021610 NA coding downstream 104867 22947324 ~ 22956666 (-)
AMCG00021609 NA coding downstream 124232 22916457 ~ 22937301 (-)
AMCG00021620 igf2bp3,LOC108273237 coding upstream 28741 23096480 ~ 23109751 (-)
AMCG00021622 NA coding upstream 59481 23127220 ~ 23127477 (-)
AMCG00021621 tra2a,LOC107688335 coding upstream 77618 23145357 ~ 23152321 (-)
AMCG00021627 NA coding upstream 187200 23254939 ~ 23262180 (-)
AMCG00021629 NA coding upstream 198011 23265750 ~ 23303746 (-)
G87181 NA non-coding downstream 46751 23007394 ~ 23014782 (-)
G87116 NA non-coding downstream 370644 22690608 ~ 22690889 (-)
G87092 NA non-coding downstream 432642 22628599 ~ 22628891 (-)
G86997 NA non-coding downstream 873393 22130806 ~ 22188140 (-)
G86925 NA non-coding downstream 1276399 21784876 ~ 21785134 (-)
G87193 NA non-coding upstream 7895 23075634 ~ 23076015 (-)
G87203 NA non-coding upstream 21863 23089602 ~ 23091111 (-)
G87218 NA non-coding upstream 25849 23093588 ~ 23106188 (-)
G87234 NA non-coding upstream 129842 23197581 ~ 23197843 (-)
G87269 NA non-coding upstream 303451 23371190 ~ 23372192 (-)
AMCG00021569 NA other downstream 1390218 21666402 ~ 21671315 (-)
G86808 NA other downstream 1977963 21063858 ~ 21083570 (-)
AMCG00021534 bet1,LOC107669829,LOC107722155 other downstream 2336653 20721884 ~ 20724880 (-)
G86649 NA other downstream 2663750 20395612 ~ 20397783 (-)
G86640 NA other downstream 2701278 20358301 ~ 20360255 (-)
AMCG00021619 NA other upstream 87448 23155187 ~ 23160991 (-)
AMCG00021630 NA other upstream 261586 23329325 ~ 23332968 (-)
G87263 NA other upstream 270512 23338251 ~ 23338484 (-)
AMCG00021634 NA other upstream 427286 23495025 ~ 23498761 (-)
AMCG00021662 NA other upstream 1131797 24199536 ~ 24210205 (-)

Expression


Co-expression Network