Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00021639 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 23697644 ~ 23698829 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00021639 | True | 1101 | mRNA | 0.43 | 2 | 23697644 | 23698829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021636 | NA | coding | downstream | 11798 | 23677831 ~ 23685846 (-) |
| AMCG00021635 | hoxa2aa,hoxa2,hoxa2b,LOC107685611,LOC107684556 | coding | downstream | 24068 | 23671425 ~ 23673576 (-) |
| AMCG00021637 | NA | coding | downstream | 30434 | 23666593 ~ 23667210 (-) |
| AMCG00021629 | NA | coding | downstream | 393898 | 23265750 ~ 23303746 (-) |
| AMCG00021627 | NA | coding | downstream | 435464 | 23254939 ~ 23262180 (-) |
| AMCG00021641 | NA | coding | upstream | 10372 | 23709201 ~ 23710134 (-) |
| AMCG00021640 | NA | coding | upstream | 12680 | 23711509 ~ 23720100 (-) |
| AMCG00021642 | NA | coding | upstream | 25632 | 23724461 ~ 23727144 (-) |
| AMCG00021643 | NA | coding | upstream | 33613 | 23732442 ~ 23742554 (-) |
| AMCG00021644 | hoxa13b,LOC105018810 | coding | upstream | 58047 | 23756876 ~ 23758021 (-) |
| G87287 | cbx3,LOC108425284,LOC105023664 | non-coding | downstream | 209432 | 23482972 ~ 23488212 (-) |
| G87282 | NA | non-coding | downstream | 215744 | 23433216 ~ 23481900 (-) |
| G87269 | NA | non-coding | downstream | 325452 | 23371190 ~ 23372192 (-) |
| G87234 | NA | non-coding | downstream | 499801 | 23197581 ~ 23197843 (-) |
| G87218 | NA | non-coding | downstream | 591456 | 23093588 ~ 23106188 (-) |
| G87427 | NA | non-coding | upstream | 378070 | 24076899 ~ 24077107 (-) |
| G87428 | LOC103376870 | non-coding | upstream | 381907 | 24080736 ~ 24133311 (-) |
| G87495 | NA | non-coding | upstream | 579808 | 24278637 ~ 24279387 (-) |
| G87573 | NA | non-coding | upstream | 847253 | 24546082 ~ 24548123 (-) |
| G87627 | NA | non-coding | upstream | 1288613 | 24987442 ~ 24989739 (-) |
| AMCG00021634 | NA | other | downstream | 198883 | 23495025 ~ 23498761 (-) |
| G87263 | NA | other | downstream | 359160 | 23338251 ~ 23338484 (-) |
| AMCG00021630 | NA | other | downstream | 364676 | 23329325 ~ 23332968 (-) |
| AMCG00021619 | NA | other | downstream | 536653 | 23155187 ~ 23160991 (-) |
| AMCG00021569 | NA | other | downstream | 2026329 | 21666402 ~ 21671315 (-) |
| AMCG00021662 | NA | other | upstream | 500707 | 24199536 ~ 24210205 (-) |
| AMCG00021668 | NA | other | upstream | 644071 | 24342900 ~ 24363459 (-) |
| G87674 | NA | other | upstream | 1704821 | 25403650 ~ 25406538 (-) |
| G87806 | NA | other | upstream | 2206615 | 25905444 ~ 25908005 (-) |
| AMCG00021700 | NA | other | upstream | 2392398 | 26091227 ~ 26105391 (-) |
