AMCG00021642


Basic Information

Item Value
gene id AMCG00021642
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23724461 ~ 23727144 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021642
GTGACCCTTTAACAGCCGGCGCACtgatttattctttattgtgCTGCCGTGCGGTCACGTGGCCCGGGGGCCCAATGGGGCGCCAGTCTGCGCGCAACTTATTAGCTGACTGTAGTCTTTGTGAGGCCAAGTTGCTGCTTGAATTCTAGTTTCTTATTTTGTGAACATAGTCCGGTGTATGtgtggcgtgtgtgtgtgtgtgtgtttgtgtatatgtgtgtttattgcatGCAATGTCGGCTTCAGGGACTCTCAGTAATTATTATGTGGACTCTCTTATTATCCACGAGAGTGAGGATCCTTTACAGCCCAGATATCCCACTGGTCCAGGGGTTCAACAAGCAAGACAGCCAGCTTTGCCCGAGCACACCGAGCTGACCCCATGCAGTTTCCAGACGAAATCCTCTGTGTTTGGCACATCCTGGAGCCCCGTGCATGCTCAGCCTCCCAGCAGTGTGGCCTCGGTCTACCATCCGTATGCGCATCACCAAGGGCCAGCTGGGGAGTCCGATGGAAGGTACTTGAGGTCTTGGTTACTGGAGCCCATGTCTGGATCCCTGCCTTTCCCCGGATTACCATCGAACAGGCAGTACGGTGTCAAACCCGAGCCTCTGAGCCGGAGAGGCGACTGCGCCACGTTTGAGACGCACACCCTGGTTCTGTCCGATTTTGCCACTGGATCCTCCCCGGCAGAGAAGGAGAAGCATCCCAGCGAAGTAGCCTTTTCCGACGGGAATGGAGAGAATGTGTCAGCCGAGGAGAAATCAGAAGTTGATGCTATATTTTCCTGCCCGTG

Function

GO:

id name namespace
GO:0045936 negative regulation of phosphate metabolic process biological_process
GO:0042325 regulation of phosphorylation biological_process
GO:0042326 negative regulation of phosphorylation biological_process
GO:0010563 negative regulation of phosphorus metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021642 True 796 mRNA 0.54 2 23724461 23727144

Neighbor

gene id symbol gene type direction distance location
AMCG00021640 NA coding downstream 4361 23711509 ~ 23720100 (-)
AMCG00021641 NA coding downstream 14327 23709201 ~ 23710134 (-)
AMCG00021639 NA coding downstream 25632 23697644 ~ 23698829 (-)
AMCG00021636 NA coding downstream 38615 23677831 ~ 23685846 (-)
AMCG00021635 hoxa2aa,hoxa2,hoxa2b,LOC107685611,LOC107684556 coding downstream 50885 23671425 ~ 23673576 (-)
AMCG00021643 NA coding upstream 5298 23732442 ~ 23742554 (-)
AMCG00021644 hoxa13b,LOC105018810 coding upstream 29732 23756876 ~ 23758021 (-)
AMCG00021647 hibadh,LOC107744697,LOC107596727,LOC107550829,LOC107685537,LOC107743154 coding upstream 86828 23813972 ~ 23824776 (-)
AMCG00021646 hibadh,LOC101062690,LOC106570522,LOC108441516 coding upstream 117527 23844671 ~ 23848491 (-)
AMCG00021649 jazf1,LOC108242006,LOC108441515,LOC107550831,LOC572950 coding upstream 158148 23885292 ~ 23892646 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 236249 23482972 ~ 23488212 (-)
G87282 NA non-coding downstream 242561 23433216 ~ 23481900 (-)
G87269 NA non-coding downstream 352269 23371190 ~ 23372192 (-)
G87234 NA non-coding downstream 526618 23197581 ~ 23197843 (-)
G87218 NA non-coding downstream 618273 23093588 ~ 23106188 (-)
G87427 NA non-coding upstream 349755 24076899 ~ 24077107 (-)
G87428 LOC103376870 non-coding upstream 353592 24080736 ~ 24133311 (-)
G87495 NA non-coding upstream 551493 24278637 ~ 24279387 (-)
G87573 NA non-coding upstream 818938 24546082 ~ 24548123 (-)
G87627 NA non-coding upstream 1260298 24987442 ~ 24989739 (-)
AMCG00021634 NA other downstream 225700 23495025 ~ 23498761 (-)
G87263 NA other downstream 385977 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 391493 23329325 ~ 23332968 (-)
AMCG00021619 NA other downstream 563470 23155187 ~ 23160991 (-)
AMCG00021569 NA other downstream 2053146 21666402 ~ 21671315 (-)
AMCG00021662 NA other upstream 472392 24199536 ~ 24210205 (-)
AMCG00021668 NA other upstream 615756 24342900 ~ 24363459 (-)
G87674 NA other upstream 1676506 25403650 ~ 25406538 (-)
G87806 NA other upstream 2178300 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 2364083 26091227 ~ 26105391 (-)

Expression


Co-expression Network