AMCG00021648 (creb5,LOC107550799)


Basic Information

Item Value
gene id AMCG00021648
gene name creb5,LOC107550799
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23955929 ~ 23974179 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021648
AGATTCGACCAAACCGTTGACATCTGGAGAAGTGAGTTTAAACCTGGTGATTGCCACCTGGCCGGCTCAGGGCTGGGGAGGcctggggtggtgggggggcacagGGGTGGCGAGGTCACCCAGTTCCAGCTGATACTCACTGGGAAAGAACGCTTTCCCACCGAGGATCACCTGATGATTCACAGGCACAAGCATGAAATGACTTTGAAGTTTCCATCAATAAAAACCGATAATATATTATCAGACCAGACACCAACGCCGACTCGGTTTCTGAAGAACTGCGAAGAAGTCGGCCTCTTCAATGAGCTCGATTGCTCCATCGAGCAGGAGTTCAGGAAGGCCCAGGAAGAGGAGGACAGCAAACGGAACATTTCACTGCATGGCACAGCAGGACCATCTCTCCACCAGCCCCCCCACTCGAGGATGCCAAACCATGACACCAGCATTGTTATCCAGCAGGCCTTGCCCTCCCCGCAGTCCAGTTCGGTCATCACACAAGCACCTTCCACCAACAGACAGATCGGG

Function

symbol description
creb5 Enables DNA-binding transcription factor activity; identical protein binding activity; and sequence-specific double-stranded DNA binding activity. Involved in positive regulation of transcription, DNA-templated. Located in extracellular exosome.

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 5 isoform X2

GO: NA

KEGG:

id description
K09047 CREB5, CREBPA; cyclic AMP-responsive element-binding protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021648 True 525 mRNA 0.54 4 23955929 23974179

Neighbor

gene id symbol gene type direction distance location
AMCG00021645 NA coding upstream 72777 23853919 ~ 23883152 (+)
AMCG00021638 NA coding upstream 173102 23779770 ~ 23782827 (+)
AMCG00021631 NA coding upstream 442191 23506699 ~ 23513738 (+)
AMCG00021632 NA coding upstream 467721 23482955 ~ 23488208 (+)
AMCG00021633 NA coding upstream 475377 23470032 ~ 23480552 (+)
AMCG00021651 LOC106537063,LOC106517749 coding downstream 46686 24020865 ~ 24029573 (+)
AMCG00021655 chn2,LOC107685541,LOC107745376,LOC107550834,LOC107596649 coding downstream 154820 24128999 ~ 24135047 (+)
AMCG00021654 chn2,LOC107684543,LOC107550834,LOC107745376 coding downstream 177885 24152064 ~ 24172881 (+)
AMCG00021658 LOC106574036,LOC103150415 coding downstream 246742 24220921 ~ 24232757 (+)
AMCG00021659 NA coding downstream 299916 24274095 ~ 24276540 (+)
G87321 NA non-coding upstream 263781 23687325 ~ 23692148 (+)
G87313 hoxa3 non-coding upstream 277326 23673892 ~ 23678603 (+)
G87288 NA non-coding upstream 371593 23489081 ~ 23584336 (+)
G87233 NA non-coding upstream 758060 23197621 ~ 23197869 (+)
G87215 NA non-coding upstream 764176 23145004 ~ 23191753 (+)
G87402 NA non-coding downstream 55665 24029844 ~ 24032117 (+)
G87423 LOC103376870 non-coding downstream 106557 24080736 ~ 24139508 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding downstream 242195 24216374 ~ 24218824 (+)
G87482 NA non-coding downstream 286783 24260962 ~ 24261617 (+)
G87525 NA non-coding downstream 385325 24359504 ~ 24360909 (+)
AMCG00021602 NA other upstream 1244785 22697164 ~ 22711144 (+)
AMCG00021591 NA other upstream 1664788 22270871 ~ 22291141 (+)
AMCG00021560 NA other upstream 2698740 21241666 ~ 21257189 (+)
G86861 mios,LOC106605261,LOC106582151 other upstream 2719849 21235070 ~ 21236080 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other upstream 2723076 21229852 ~ 21232853 (+)
AMCG00021656 NA other downstream 200224 24174403 ~ 24178092 (+)
AMCG00021657 NA other downstream 209029 24183208 ~ 24198827 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other downstream 935705 24909884 ~ 24949100 (+)
AMCG00021682 NA other downstream 1302597 25276776 ~ 25372339 (+)
AMCG00021692 NA other downstream 1778178 25752357 ~ 25753253 (+)

Expression


Co-expression Network