AMCG00021650


Basic Information

Item Value
gene id AMCG00021650
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23934484 ~ 23942615 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021650
ATGGAGATGGAAGATGGAGATGAAGGCATTCTCAGGTTCTTATGGCATATTCAATGTAACACCATGACAGGCATCGCCgccgcctccttcttctccaaCACCTGCAGGTTCGGGGGCTGCGGACTTCACTTCTCCACCTTGGCCGAGCTCATCGAGCACATCGAGGACAACCACATCGGTAAATAG

Function

GO:

id name namespace
GO:0007368 determination of left/right symmetry biological_process
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021650 True 186 mRNA 0.53 2 23934484 23942615

Neighbor

gene id symbol gene type direction distance location
AMCG00021649 jazf1,LOC108242006,LOC108441515,LOC107550831,LOC572950 coding downstream 41838 23885292 ~ 23892646 (-)
AMCG00021646 hibadh,LOC101062690,LOC106570522,LOC108441516 coding downstream 85993 23844671 ~ 23848491 (-)
AMCG00021647 hibadh,LOC107744697,LOC107596727,LOC107550829,LOC107685537,LOC107743154 coding downstream 109708 23813972 ~ 23824776 (-)
AMCG00021644 hoxa13b,LOC105018810 coding downstream 176463 23756876 ~ 23758021 (-)
AMCG00021643 NA coding downstream 191930 23732442 ~ 23742554 (-)
AMCG00021653 NA coding upstream 109975 24052590 ~ 24054872 (-)
AMCG00021652 LOC107743225,LOC107550833,LOC107743199 coding upstream 114188 24056803 ~ 24073972 (-)
AMCG00021660 fkbp14,LOC106943903 coding upstream 273253 24215868 ~ 24220678 (-)
AMCG00021661 NA coding upstream 294660 24237275 ~ 24256623 (-)
AMCG00021663 NA coding upstream 319286 24261901 ~ 24277596 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 446272 23482972 ~ 23488212 (-)
G87282 NA non-coding downstream 452584 23433216 ~ 23481900 (-)
G87269 NA non-coding downstream 562292 23371190 ~ 23372192 (-)
G87234 NA non-coding downstream 736641 23197581 ~ 23197843 (-)
G87218 NA non-coding downstream 828296 23093588 ~ 23106188 (-)
G87427 NA non-coding upstream 134284 24076899 ~ 24077107 (-)
G87428 LOC103376870 non-coding upstream 138121 24080736 ~ 24133311 (-)
G87495 NA non-coding upstream 336022 24278637 ~ 24279387 (-)
G87573 NA non-coding upstream 603467 24546082 ~ 24548123 (-)
G87627 NA non-coding upstream 1044827 24987442 ~ 24989739 (-)
AMCG00021634 NA other downstream 435723 23495025 ~ 23498761 (-)
G87263 NA other downstream 596000 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 601516 23329325 ~ 23332968 (-)
AMCG00021619 NA other downstream 773493 23155187 ~ 23160991 (-)
AMCG00021569 NA other downstream 2263169 21666402 ~ 21671315 (-)
AMCG00021662 NA other upstream 256921 24199536 ~ 24210205 (-)
AMCG00021668 NA other upstream 400285 24342900 ~ 24363459 (-)
G87674 NA other upstream 1461035 25403650 ~ 25406538 (-)
G87806 NA other upstream 1962829 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 2148612 26091227 ~ 26105391 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_08205087_08210367 NA coding CI01000016 null 8204854 ~ 8211114 (+)
eurasian perch (Perca fluviatilis) G73897 NA non-coding NC_053118.1 CM020915.1 19806775 ~ 19807069 (-)