AMCG00021653


Basic Information

Item Value
gene id AMCG00021653
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24052590 ~ 24054872 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021653
ATGGAAAGCCTATGTGCAGTCCGCTTGACGATACTTCTGTGCTTCATCTGTCCTGCAAACGCGATCTGTCCCGACCGATGCGACTGTCAGCACTCGCAGCATCTGCTGTGCACAAACCGGGGGCTGCGCTCCGTGCCCAAAGCCGGCGTGCACAACCCGGAGGAGATCCTCATCTTCAGCCTGGGAGGTAACTTCATCCACAACATCTCCGCCTTCGACTTCGTCCGCTTTGGCCAGATGATCCGACTGGACTTGCAATACAATCAAATCCAGTCGATTCACCCGAAAGCGTTTGAGAAACTGTGCAGACTGGAGGAGCTGTATTTGGGGAATAACCTCATAACCAGTGTTTCTACGGGCACTTTACTATCTCTGAAAAAACTCAGGATCCTATATGCCAACAGCAACGAGATCAAAAAGCTGACGGCAGAGTCCTTTGCGAGCTTAGACAGCCTGATAAAGCTGAGACTGGACAGCAACGCCATCGAGATCCTCCAGGATGCGCTTTTTAAGAGCCTGGCGAATTTGCTGTATCTCCACTTGGAGACGAATAAAATTCGCCACATTCACAGAAACGCCTTTGCCAAACTGAGCAAACTCCGCTTCCTGAACCTGTCTGGGAACAAGCAGACCGCGATCCGCAGTGTGTTCACGTTTGCGCAGCTCACCTCCCTCACCACCCTGCTGCTGTGTGACAATGACATCCAGCAAGTTGGGGACCACGTCTTTCAAAACCTGCACAAGCTGTCAAAACTGGCTCTGAGCAACAACAAGATCTCCCAGGTCGGCACGGAGGCTCTGAAAGGACTGTCGGGCGTCAGGGAATTGCTGATGGATGGCAACCTACTCACAGACATCCCTCTGGGGCTGCTGGATCCTTTGGAGAAGATAGAGGAACTGGACTTCAGTAATAATCTCATCAGTAACAACTCCAAGGTATGTTTGCCATCTCAGTTGGGTTCAATAGAAAGTGTTACCTCAGGCCGTGTGGAAGAGCAACAGTCTGTCCAAGAGGTTAATATCCAGGCAGACCAGGGAGGGCCAGGAGAGCCTGAGAAATTGTCTGTGGAAAAAAGCAAACGAAAGAAGGAGGCCAGCACCCATAGGACAAGATCTTCTACACTGGGAAGAAAAAATGCCTCAGCGTCTGCAGGAAGGCCTGAGAGAGGAAAGCTTTTAGTGACCCCAGCCAACCTAAATGCCACCGCACAGGCTGAGGTGACCAAAGTCAATCCACCTGCCCTGACAACATCACACCCTTCTGAAGCCAAAGCGGAGAAGTTCAACTTATTGAAGAATGTGGATTTTCCTGTGGTGGTGGATCCCTGCGAGTTCAACAGGTTCTTCATCCTAAACATCACAGCCAATCAAGTGACGTCCACCGCAGCCACCATTCACTGGACAGTGTTGGACCATCAAGGCCCAATGAACTCCCAAGTGCATTTCAGAGTGCTCTTTGATCGCTTTGGCCAGCCAGTGAGGTTTCATCGCTTTATTTATGTGCGGGACCAGTCTAACTCAGTCACTCTGCAGGAGCTGAAAGAGGACACCACCTATATGGTTTGCATCGAGAGTGTAATAGCCGACCTTGTCTGCCAGGTGGCCTCCAGGGACCACTGCACAGGAGTGGTCACTCTCCCAGAGAAGCAGGGCTCTGTGGACTTCCAGCTGCTCACTGTGATTATGTTGGGCGTCAACGCTCTGCTTGTGTTCGTGGTCGTGTCTGTATGGCTCTCCAAGTCTCTACGGAAGAAGCTGAACAAAAGGAAGTCCGCGGTGCACGTGAGGCAGATGTACTCGACCAGGCGGCCGCTGCGCTCCATGGGCACCGGCGTGTCAGCGGACTTCACCGGGTATCAGTCGAACCGGCCACGGAACGTAATGTGCGCCATCGACGAGGCAGATCTCATCGAGTTTCCTTGTGACCGTTTTCTCGATGGCAACGTCAGGCGTGAGGAGGTAATGCAGCAGAGGTTCTCGGACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021653 True 1986 mRNA 0.52 2 24052590 24054872

Neighbor

gene id symbol gene type direction distance location
AMCG00021650 NA coding downstream 109975 23934484 ~ 23942615 (-)
AMCG00021649 jazf1,LOC108242006,LOC108441515,LOC107550831,LOC572950 coding downstream 159944 23885292 ~ 23892646 (-)
AMCG00021646 hibadh,LOC101062690,LOC106570522,LOC108441516 coding downstream 204099 23844671 ~ 23848491 (-)
AMCG00021647 hibadh,LOC107744697,LOC107596727,LOC107550829,LOC107685537,LOC107743154 coding downstream 227814 23813972 ~ 23824776 (-)
AMCG00021644 hoxa13b,LOC105018810 coding downstream 294569 23756876 ~ 23758021 (-)
AMCG00021652 LOC107743225,LOC107550833,LOC107743199 coding upstream 1931 24056803 ~ 24073972 (-)
AMCG00021660 fkbp14,LOC106943903 coding upstream 160996 24215868 ~ 24220678 (-)
AMCG00021661 NA coding upstream 182403 24237275 ~ 24256623 (-)
AMCG00021663 NA coding upstream 207029 24261901 ~ 24277596 (-)
AMCG00021666 ankrd28 coding upstream 224720 24279592 ~ 24307071 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 564378 23482972 ~ 23488212 (-)
G87282 NA non-coding downstream 570690 23433216 ~ 23481900 (-)
G87269 NA non-coding downstream 680398 23371190 ~ 23372192 (-)
G87234 NA non-coding downstream 854747 23197581 ~ 23197843 (-)
G87218 NA non-coding downstream 946402 23093588 ~ 23106188 (-)
G87427 NA non-coding upstream 22027 24076899 ~ 24077107 (-)
G87428 LOC103376870 non-coding upstream 25864 24080736 ~ 24133311 (-)
G87495 NA non-coding upstream 223765 24278637 ~ 24279387 (-)
G87573 NA non-coding upstream 491210 24546082 ~ 24548123 (-)
G87627 NA non-coding upstream 932570 24987442 ~ 24989739 (-)
AMCG00021634 NA other downstream 553829 23495025 ~ 23498761 (-)
G87263 NA other downstream 714106 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 719622 23329325 ~ 23332968 (-)
AMCG00021619 NA other downstream 891599 23155187 ~ 23160991 (-)
AMCG00021569 NA other downstream 2381275 21666402 ~ 21671315 (-)
AMCG00021662 NA other upstream 144664 24199536 ~ 24210205 (-)
AMCG00021668 NA other upstream 288028 24342900 ~ 24363459 (-)
G87674 NA other upstream 1348778 25403650 ~ 25406538 (-)
G87806 NA other upstream 1850572 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 2036355 26091227 ~ 26105391 (-)

Expression


Co-expression Network