AMCG00021659


Basic Information

Item Value
gene id AMCG00021659
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24274095 ~ 24276540 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021659
ATGCAGCTGTCTGTGCTGATAAAGATCGCTGctctctggcagtgctcctttGGGCTCTCCCAGGCCAGCGAAGGAGCCCATTATATCGCTGCTGTTTATGAGCACAACATCATCTTTAACCCCGACCCCAAGGTTCCTCGCAGTCGCCAGGCAGCGCTGGATCACATGAAAGAGAACCTGGATATATATGAAGAGCAAGTGGCTGCAGCTGCAAAACAGGGCGCACAGATAATAGTGTTTCCAGAAGACGGACTCCATGGTTTCAACTACACTAGAGAGTCCATTGTTTCGTATTCGGAGACGATTCCTGATCCGGCCTCAATGAGCTGGAGCCCCTGTCTTCAGCCAGAGAGGTTCAATGGCACTGAGGTTCTTCATCGGCTGAGCTGTATGGCACACAAGCATGCAGTGTATTTAGTGGCAAATATGCCCGATCGCCAAGAATGTGACAGCACAGATCCACACTGCCCCCCAGATGGCAGATATCAGTTCAATACGGATGTCGTCTTCAGTGATGATGGAACAATAGTGGCCAGGTATCATAAACAAAACCTGTATTTTGAATCTGAATTTAACACCCCTAGAGAATGCGAGTACGTCACATTTGACACTCCATTCGCCGGGAGGTTTGGCCTCTTCACGTGTTTCGACATTCTCTTCCACGAACCGGTCATTACCCTTCTAGAAAAGTatcaagtaaaacaaatgatctTTCCCACGGCCTGGTTTAACGAAGCCCCCCTGCTGTCTGCGCATCAGTTCCAGAAAGCATTTGCCACAGGTTCGGGAATTAACCTCCTAGCAGCTAATTTGCATCACCCTCCACTCCGCATGACTGGGAGTGGCATTTTCACGCCCTCACACTCAGTTTACCACTTTGACATGGAAACGGATAAAGGCAGACTGCTGGTGAGCAATGTTTCACTCCCTACTGACTCTGAGACAGGTTCACCACCTACCTCCGAGGTCTGCATGAAGTCCCAGGATTGTGGAAAACCCTCAGCATCAAAACCTGTAGCAGATGGGGCAGCCCCTGGAACATTCCATGGCAGTATGAGTTCAGATAATTACACCTTTGTTCCTGTACAAGGAGCAGAGGGAGATTTGACCGTGTGCGATGGCTCATTGTGCTGCCGTTTGTTGTACAATGGCTCCCATGTCCCTGAGGAGCTCTACGCTTTTGGAGTCTTCAATGGCCTACACACGGCCGCTCGACAATTTTATCTAGAGGTGTGCGCTCTGGTCAGATGTCCTGGTGACACCTTTGCCAGTTGCGGGGGGGAGGTCACTGCTGGAGATCAAACCATCACCACAATAGATTTCCATTTAGAGGGCAACTTTAGCACCCGTTACATTTACCCCAGTATCCTAACCAGTGGCATGCAGCTTGATTCCCCAGACAGGGTGGGTTGGGAGAAGGAGAGCTACGTCATGagtaaaaaacacatttctggtGGCCTTGTCACAGCTACACTGTATGGAAGACATTACGAGAAGGACTGA

Function

GO: NA

KEGG:

id description
K01435 BTD; biotinidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021659 True 1503 mRNA 0.50 3 24274095 24276540

Neighbor

gene id symbol gene type direction distance location
AMCG00021658 LOC106574036,LOC103150415 coding upstream 41338 24220921 ~ 24232757 (+)
AMCG00021654 chn2,LOC107684543,LOC107550834,LOC107745376 coding upstream 101214 24152064 ~ 24172881 (+)
AMCG00021655 chn2,LOC107685541,LOC107745376,LOC107550834,LOC107596649 coding upstream 139048 24128999 ~ 24135047 (+)
AMCG00021651 LOC106537063,LOC106517749 coding upstream 244522 24020865 ~ 24029573 (+)
AMCG00021648 creb5,LOC107550799 coding upstream 299916 23955929 ~ 23974179 (+)
AMCG00021665 NA coding downstream 66312 24342852 ~ 24353253 (+)
AMCG00021664 NA coding downstream 95327 24371867 ~ 24377488 (+)
AMCG00021671 NA coding downstream 167767 24444307 ~ 24457362 (+)
AMCG00021672 plcl2,LOC106605271,LOC106582018,LOC107688208 coding downstream 237578 24514118 ~ 24522275 (+)
AMCG00021678 kat2b,LOC106588888,LOC106570503 coding downstream 710937 24987477 ~ 25007730 (+)
G87482 NA non-coding upstream 12478 24260962 ~ 24261617 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding upstream 55271 24216374 ~ 24218824 (+)
G87423 LOC103376870 non-coding upstream 134587 24080736 ~ 24139508 (+)
G87402 NA non-coding upstream 241978 24029844 ~ 24032117 (+)
G87321 NA non-coding upstream 581947 23687325 ~ 23692148 (+)
G87525 NA non-coding downstream 82964 24359504 ~ 24360909 (+)
G87704 NA non-coding downstream 1252784 25529324 ~ 25529585 (+)
G87765 NA non-coding downstream 1555914 25832454 ~ 25832988 (+)
G87786 NA non-coding downstream 1608906 25885446 ~ 25885703 (+)
G87824 NA non-coding downstream 1814636 26091176 ~ 26094196 (+)
AMCG00021657 NA other upstream 75268 24183208 ~ 24198827 (+)
AMCG00021656 NA other upstream 96003 24174403 ~ 24178092 (+)
AMCG00021602 NA other upstream 1562951 22697164 ~ 22711144 (+)
AMCG00021591 NA other upstream 1982954 22270871 ~ 22291141 (+)
AMCG00021560 NA other upstream 3016906 21241666 ~ 21257189 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other downstream 633344 24909884 ~ 24949100 (+)
AMCG00021682 NA other downstream 1000236 25276776 ~ 25372339 (+)
AMCG00021692 NA other downstream 1475817 25752357 ~ 25753253 (+)
AMCG00021693 NA other downstream 1567154 25843694 ~ 25870195 (+)
AMCG00021703 galnt12 other downstream 1875528 26152068 ~ 26197076 (+)

Expression


Co-expression Network