AMCG00021660 (fkbp14,LOC106943903)


Basic Information

Item Value
gene id AMCG00021660
gene name fkbp14,LOC106943903
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24215868 ~ 24220678 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021660
GGCGTTTGTGAGCGTGTttgggagggaaagagagggttTGGGTCTGCCACGTATGCGGCCGTGTGGATGTGGACGATGCATGCTCTTTTCACACGTGTTTCATATCTGTGTAGTCGGTAGAAGACAGTGCTAGTTCCATATCCCCgtgctgttttgttattttcgaCCATGTTGCTGGCGACTTTGAATTGTTTTTGCACATCATTAATGATGCTGGTGAGTGGGGCCAAGCTCCCGGAGCCGGAGGTGAAAGTAGAGATTCAGCACAGACCTTTTCTCTGCCACCGAAAGACCAAGTATGGAGACATGCTACTCGTGCACTACGACGGGTTTTTGGAGGGCAACGGGACTAGATTCCACTCCAGCCGCAATCAAGGGGATAAACACCCTGTTTGGTTTACTCTTGGGATAAAGGAAGTTATCAAAGGCTGGGACAAAGGACTCCAGGACATGTGTGTAGGGGAGAAAAGAAAGCTGACTGTCCCATCAGCCCTTGCCTATGGAAAAGAAGGCAAAGGGAAAATTCCACCTGATAGCACACTGATATTTGACATTGAATTGATGGAGATCAGAAATGGACCCAGGTCTCATGAATCATTTCAGCAAATGGACCTTAACGATGACTGGAAGCTGTCTCGAGTGGAGGTAAAGGAATATCTGAGGAAGGAGTTTGAGAGACATGGTTATTCTCCCAATGACACTCAGCATGAAGTCATGGTGGAAGATATTTTCAAGAAAGAAGATGAAGATAACGATGGCTATATATCTGCAAGAGAGTTTACCTACAAGCACGAcgaattgtaaaaaaaaaaaaaaaatcaagattttATGATGCCAAAGTGGCTTTTGAATATGAACTGTGTCGGTATTTTGGGCTCCTTTACTCTGATATATTTGTTGGATTTTTATAAGACGTGTACTGATCTTGAGGTAATATTGTCTTTTAGACAGAAGTGTCTGCATGTGACCATTCCACTGTTATCAGATGTAAAGGATAACTTCCAAAGTACATAGGTTATGGGGTATTCCAGATGTCACATAGAAACAAACGGAGATCGTTTCAGGCCTATGTATTTTCCacaataattaaagtaaatgttgtatttttcacattaagATTAGATTGGTTATAGGATTtagttgttaaaaatgtttacatttatttgtgatttattttaaactttgatgTGATCTGAGGACCAATGCTCAAAGCCctgatttaatatgaaaaatctGTCAACCGAGTTATTGTGGAAATGGGATTATTCATAACAGTGTTCCCTAATAGGAAATAAACCACGTTTTGTCCTAGTCCTACCACTGTAATATTTATAGCTAATGTCTTTACTTCTCCCAGTTGCTCTTGTACAGGAGCACAGTGCtgtataagaaaaaataaaaaataaaaagccctgTAAGCACATTAAAGGATTAATTGCCAAAATTTCAGTGACCTGTGGCAAACATGATTAATGAACTTTGAAGTATGACATCAATAACTGAAAGCGCACAATAGGATTTTGCATAACAGTGGTGGATAAATAGTGAGTAGGTtgggtatttttatttgttatttgagTTTGAACTTTCCCATTAAAAATCTGAATTCCTTTTTCCAATACAAACGTCGCCTTTGGTTGTACTAGATCGCTCTAATATGAAAGCTTTTATCCATGTAATTTTATTTGAGCCTTATCTAACAATAATGTGGATCTGTGTGTCTGATTATCATGGGCATGGATTCAAATTGCTGTCTTAAATCGGTATGAAAGTTGttcaaacacacaatgttgtgtgATCAGCCAAATGCATGATACCGGTAAATCTTATTCAAATATACTTCAGTATTTCTAGGGTGAGGAAAGGCAAATTATTTAGAGTGCAGATCACCTGTACACCACTGTGTGGCATCATTCAGTCATTTTCCTCTTCATCCTCCCAGTGATAGACCAGCCTGGCATGATGTAATGATGTCACCATACTAATTTTTCACACACATCCCATAAGAATGCCTGGAACATGTAGGAATGCGGTTTCTGAAACGCAGCATTGTACTGCCCTATATGTTGCTTTTTAAGATGTCTTTTCACAGTATGTTTTCAGTACAGGGGTGTCTCCCTCTGGTGTAGCCTTTTACCACACTGGTCGTATTTTTGTGTTAATCATTAACCTATGTTTTAGAGTTTCTGCATGTCATGCCATTTTGACTCAATATTGCAATTACCAGTCCAGATGTTTCACAGACAGTGCATTACAGAAGACATCTGTAAGAAAATACTGTAAACTTCtgctgtgaaaagaaaagatgGAGATAAGGTATTCGCCTAGGTATttggtttctgtgtgtttaatgttaatattttaatcttgttCTTCTCACTTTTGGTAGAACATGTAAGCAAAACAACAGTGGATTTGGCCTCTGGAACTCAACTTATCCAACTTATCAACACCTAGCAGgtcatcacattattttcagttccTCAGCAGGCAGGCTTATGTTAAGGTctaattttgtgttttagttgAGTTCAGTTTCAAAACTAAAGGGGTAACTGTTAGCCAAACTTAATTACATGCACAAAAATCCCCTTTTTAACATGCACATATGTAAATCCTTTAGACATAGCAATATTGTCTTTAGGATAGCAAGATGAAACATggctatgtaatatttattggtatttaaatattaaagtgacGAGgttctataaaatataatagtGGTTTGCTCTCCTTTTTCTTGAATGCAG

Function

symbol description
fkbp14 Predicted to enable calcium ion binding activity and peptidyl-prolyl cis-trans isomerase activity. Is expressed in notochord. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome kyphoscoliotic type 2. Orthologous to human FKBP14 (FKBP prolyl isomerase 14).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP14

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09577 FKBP14; FK506-binding protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021660 True 2753 mRNA 0.38 4 24215868 24220678

Neighbor

gene id symbol gene type direction distance location
AMCG00021652 LOC107743225,LOC107550833,LOC107743199 coding downstream 141896 24056803 ~ 24073972 (-)
AMCG00021653 NA coding downstream 160996 24052590 ~ 24054872 (-)
AMCG00021650 NA coding downstream 273253 23934484 ~ 23942615 (-)
AMCG00021649 jazf1,LOC108242006,LOC108441515,LOC107550831,LOC572950 coding downstream 323222 23885292 ~ 23892646 (-)
AMCG00021646 hibadh,LOC101062690,LOC106570522,LOC108441516 coding downstream 367377 23844671 ~ 23848491 (-)
AMCG00021661 NA coding upstream 16597 24237275 ~ 24256623 (-)
AMCG00021663 NA coding upstream 41223 24261901 ~ 24277596 (-)
AMCG00021666 ankrd28 coding upstream 58914 24279592 ~ 24307071 (-)
AMCG00021667 NA coding upstream 146047 24366725 ~ 24369123 (-)
AMCG00021669 NA coding upstream 161359 24382037 ~ 24412448 (-)
G87428 LOC103376870 non-coding downstream 82557 24080736 ~ 24133311 (-)
G87427 NA non-coding downstream 138761 24076899 ~ 24077107 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 727656 23482972 ~ 23488212 (-)
G87282 NA non-coding downstream 733968 23433216 ~ 23481900 (-)
G87269 NA non-coding downstream 843676 23371190 ~ 23372192 (-)
G87495 NA non-coding upstream 57959 24278637 ~ 24279387 (-)
G87573 NA non-coding upstream 325404 24546082 ~ 24548123 (-)
G87627 NA non-coding upstream 766764 24987442 ~ 24989739 (-)
G87622 NA non-coding upstream 767723 24988401 ~ 24994242 (-)
G87694 rpl15 non-coding upstream 1191726 25412404 ~ 25460562 (-)
AMCG00021662 NA other downstream 5663 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 717107 23495025 ~ 23498761 (-)
G87263 NA other downstream 877384 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 882900 23329325 ~ 23332968 (-)
AMCG00021619 NA other downstream 1054877 23155187 ~ 23160991 (-)
AMCG00021668 NA other upstream 122222 24342900 ~ 24363459 (-)
G87674 NA other upstream 1182972 25403650 ~ 25406538 (-)
G87806 NA other upstream 1684766 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 1870549 26091227 ~ 26105391 (-)
G87871 NA other upstream 1931427 26152105 ~ 26154375 (-)

Expression


Co-expression Network