AMCG00021664


Basic Information

Item Value
gene id AMCG00021664
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24371867 ~ 24377488 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021664
ATGGcatcaagaagaaaaacagatcatCTGGAGAGAACTGCTGAAAAATATCGACAAGACgtgcTGTTTCCAGCAAAAGTCTGTGGAATTCTTGATGAATCGAACAAAGTCAGAAGACTCCGTCTGGCCGTGCCAAATAAAGACTTCTCTTTTAAAGCGGGACAGTGGGTGGATTTCTATATTCCTGGCTTTCCCAAAGTTGGTGGCTTTTCTATCTGCTCCAGCCCAGGCCTGTTACAGAGAGAGGGGGTCATTGAGCTGGCTGTCAAATACAGTGAGCATCCCCCGGCCCGCTGGATACATACAGAGTGCACCCTGGACTGTGAAGTTGCCGTGCGAGTGGGGGGGGACTTCTATTTCGACCCCCAGCCCTCTGACTCCGCTGTGAACCTGTTGCTGGTGGCGGGAGGAGTGGGCATCAATCCTCTGTACTCCATCCTGCTGCACGTGGCGGACCTGCACAGACTGAGGCAGTGCGAGGACTCGGGCTACGAGCCGGGCTCAGTCCAGCTGTGCTACAGCGCCAAGAACACAGACGAGCTGCTCTTCAAGAACACCATTATTGGACTTTCTAAAGAGCTGTCGGGGAAGTTTTCCTGTGACTTCCACGTGACACAACAGGACACTGAAATCAACATGCAGCTCAGACCATACGTCAGTGAGGGAAGGATATCGGAACAAATCCTGCGGCAGCATTTATCAACCGACGCCCTGTGCTACATCTGCGGGCCACCTCCCATGATCCAGTCCGTCTCGGAACAGCTGCAGCACCTGGGGATCTCCAAGGAGAAGATACTATTTGAGAAGTGGTGGTAG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021664 True 816 mRNA 0.53 6 24371867 24377488

Neighbor

gene id symbol gene type direction distance location
AMCG00021665 NA coding upstream 18614 24342852 ~ 24353253 (+)
AMCG00021659 NA coding upstream 95327 24274095 ~ 24276540 (+)
AMCG00021658 LOC106574036,LOC103150415 coding upstream 139110 24220921 ~ 24232757 (+)
AMCG00021654 chn2,LOC107684543,LOC107550834,LOC107745376 coding upstream 198986 24152064 ~ 24172881 (+)
AMCG00021655 chn2,LOC107685541,LOC107745376,LOC107550834,LOC107596649 coding upstream 236820 24128999 ~ 24135047 (+)
AMCG00021671 NA coding downstream 66819 24444307 ~ 24457362 (+)
AMCG00021672 plcl2,LOC106605271,LOC106582018,LOC107688208 coding downstream 136630 24514118 ~ 24522275 (+)
AMCG00021678 kat2b,LOC106588888,LOC106570503 coding downstream 609989 24987477 ~ 25007730 (+)
AMCG00021685 NA coding downstream 1007308 25384796 ~ 25406102 (+)
AMCG00021684 rpl15 coding downstream 1035457 25412945 ~ 25415148 (+)
G87525 NA non-coding upstream 10958 24359504 ~ 24360909 (+)
G87482 NA non-coding upstream 110250 24260962 ~ 24261617 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding upstream 153043 24216374 ~ 24218824 (+)
G87423 LOC103376870 non-coding upstream 232359 24080736 ~ 24139508 (+)
G87402 NA non-coding upstream 339750 24029844 ~ 24032117 (+)
G87704 NA non-coding downstream 1151836 25529324 ~ 25529585 (+)
G87765 NA non-coding downstream 1454966 25832454 ~ 25832988 (+)
G87786 NA non-coding downstream 1507958 25885446 ~ 25885703 (+)
G87824 NA non-coding downstream 1713688 26091176 ~ 26094196 (+)
G87939 NA non-coding downstream 2332729 26710217 ~ 26713476 (+)
AMCG00021657 NA other upstream 173040 24183208 ~ 24198827 (+)
AMCG00021656 NA other upstream 193775 24174403 ~ 24178092 (+)
AMCG00021602 NA other upstream 1660723 22697164 ~ 22711144 (+)
AMCG00021591 NA other upstream 2080726 22270871 ~ 22291141 (+)
AMCG00021560 NA other upstream 3114678 21241666 ~ 21257189 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other downstream 532396 24909884 ~ 24949100 (+)
AMCG00021682 NA other downstream 899288 25276776 ~ 25372339 (+)
AMCG00021692 NA other downstream 1374869 25752357 ~ 25753253 (+)
AMCG00021693 NA other downstream 1466206 25843694 ~ 25870195 (+)
AMCG00021703 galnt12 other downstream 1774580 26152068 ~ 26197076 (+)

Expression


Co-expression Network