AMCG00021665


Basic Information

Item Value
gene id AMCG00021665
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24342852 ~ 24353253 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021665
ATGAGATTGAGGTGCAGGTACAGATTGTGTAGGCTGCAGTTTGTCTTCTTATGGTTGGTGTTGGGGTTCCTGGCGATGATGGTGACTTTTCTCGACCCTCTTTTCGGTGAACTTTCCAAGAAGCCGCTTCTTGTTCCGCGACACCAGCCCGAAGAGCGTCCCTGCGCCGTGGACGATGTTCTGGACCTTGATGGACTGTCCTCCCTGGGATCGCTGAAGGAAGACCAGCTGATCATAGTCACATCGAAACTGAGAAGTCAAGCAGATCATCCGAAGCAGGGGAGGTACAGGGTGCTGAGGGCTGGAGGCAGAAAAGAGACAGGCATGTCGCAGTCCACTCACGGGGATCTGGGCAAACCTGTGCACCTCTCTCTGCACGGGTCCGAGAGGGACCTGGAGGAGTCGGGACTGAAGAGACATGGGTTTAATGAAGTTGTCAGCGAGAAGATCTCTCTACACAGACGGCTGTCCGAGGTGCGTCATCCTTTGTGTCTCACACAGCAGTACAGCACACACTTGCCAACAGCCAGTGTAATCATCTGCTTCCACAACGAGGCCTGGTCCACACTGCTGAGGACAGTGCACAGTGTCCTGGACACCGTGTCTAGGGAGCTGCTGAAGGAAATCATACTGGTGGATGACCTCAGTCAACAAGGCCATCTGAAGACAGCTCTCAGTGAGTACGTGGCCCAGCTTGAGGCCGTGAAGCTGATCAGGAGCAACAAGCGCTTGGGGGTTATTGGAGGCCGGGGGCTGGGGGCGGCACGGGCCTCCGGGGATGTGATCGTGTTCATGGACTCTCACTGTGAGTGTCACCCAGGCTGGCTGGAGCCACTGCTGGATAGAATAGCAGGAGACAGAAGTCGGGTCCTGTCCCCAGTGATCGACAGCATCAACTGGAACACATTTCAGTATCATGGCTCCCCACATCCACAGAGGGGTGTGTTTGACTGGAAGCTGGATTTCCACTGGGAGCCTGTGCCCAAATACCAGCAGAAGAAACATGAATCCCCTATCCACCCTGTCAGGAGCCCTGCTTTGCCGGGTGGAGTCCTGGCTATCGAGCGTCACTATTTTCAGAGGATTGGAGCCTACGACCCCGGCATGACCTTATGGGGATTGGAGAATGTGGAGCTGTCCATCAGGGTGTGGCTCTGTGGGGGTTCCATGGAGGTCCATCCTTGTTCCAGAGTTGGACACCTGTACCGCAGTCACATCCCCTACTCTTTTCCTGATGATGACATGGTGGAGAGAAACAAGATTCGTGTGGCTGAGACCTGGCTAGACTCTTACAAGAGGATTTTTTACAAGCGAGACACAGTGGCCTACTTTATAAGCAAGGTGAGGGATGGAACATCTATTTTTCTTGCATGTGTTAGTTTTGTcatgtatgtgttatttattttattcgcTGTGCTCACTAGGCAGAGAATGCAAATTGTACGGAAAGACTGCAGCTGCGGAAGCGGCTTGGATGCAAGAACTTTCATTGGTTTCTGTCTGACGTCCACCCAGAGCTCTACATACCACAGGATACACCTGGCCACTCAGGAGAGGCAAGACTCACTGTACAATGTTGGCACTGGCTATTGTGCAGATCACAAGAATGGGTGGAGTACGATGGAACAGCCCATGGACATTTCACCCTGCAGTGGAAATGGAAATCAGCACTGCGAGTACAACACGCTGAGGGAGATCCGATGTGGCTCGGCGGGGCAGCTGTGCTTGGATGTGAGACAGGAGCGGGTCACTGTGGCCGCTTGCTCCCTGAAACAGCACACCCACCTCAGGCAGCAGTGGAGAGTGCACAGCGGAGAGATAGTGCACGTGGCGTCTGGCAAGTGCATGGAAGCAGTGGACAGTGAGGGTGGGAGGGGCCTGTTTCTGAGGGCGTGCAGTGCCGCCCCCCAGCAGCAGTGGCTTTTCGAGCAGCTGATTGTCCTGAATGAAGGTTGA

Function

GO: NA

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021665 True 1956 mRNA 0.54 9 24342852 24353253

Neighbor

gene id symbol gene type direction distance location
AMCG00021659 NA coding upstream 66312 24274095 ~ 24276540 (+)
AMCG00021658 LOC106574036,LOC103150415 coding upstream 110095 24220921 ~ 24232757 (+)
AMCG00021654 chn2,LOC107684543,LOC107550834,LOC107745376 coding upstream 169971 24152064 ~ 24172881 (+)
AMCG00021655 chn2,LOC107685541,LOC107745376,LOC107550834,LOC107596649 coding upstream 207805 24128999 ~ 24135047 (+)
AMCG00021651 LOC106537063,LOC106517749 coding upstream 313279 24020865 ~ 24029573 (+)
AMCG00021664 NA coding downstream 18614 24371867 ~ 24377488 (+)
AMCG00021671 NA coding downstream 91054 24444307 ~ 24457362 (+)
AMCG00021672 plcl2,LOC106605271,LOC106582018,LOC107688208 coding downstream 160865 24514118 ~ 24522275 (+)
AMCG00021678 kat2b,LOC106588888,LOC106570503 coding downstream 634224 24987477 ~ 25007730 (+)
AMCG00021685 NA coding downstream 1031543 25384796 ~ 25406102 (+)
G87482 NA non-coding upstream 81235 24260962 ~ 24261617 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding upstream 124028 24216374 ~ 24218824 (+)
G87423 LOC103376870 non-coding upstream 203344 24080736 ~ 24139508 (+)
G87402 NA non-coding upstream 310735 24029844 ~ 24032117 (+)
G87321 NA non-coding upstream 650704 23687325 ~ 23692148 (+)
G87525 NA non-coding downstream 6251 24359504 ~ 24360909 (+)
G87704 NA non-coding downstream 1176071 25529324 ~ 25529585 (+)
G87765 NA non-coding downstream 1479201 25832454 ~ 25832988 (+)
G87786 NA non-coding downstream 1532193 25885446 ~ 25885703 (+)
G87824 NA non-coding downstream 1737923 26091176 ~ 26094196 (+)
AMCG00021657 NA other upstream 144025 24183208 ~ 24198827 (+)
AMCG00021656 NA other upstream 164760 24174403 ~ 24178092 (+)
AMCG00021602 NA other upstream 1631708 22697164 ~ 22711144 (+)
AMCG00021591 NA other upstream 2051711 22270871 ~ 22291141 (+)
AMCG00021560 NA other upstream 3085663 21241666 ~ 21257189 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other downstream 556631 24909884 ~ 24949100 (+)
AMCG00021682 NA other downstream 923523 25276776 ~ 25372339 (+)
AMCG00021692 NA other downstream 1399104 25752357 ~ 25753253 (+)
AMCG00021693 NA other downstream 1490441 25843694 ~ 25870195 (+)
AMCG00021703 galnt12 other downstream 1798815 26152068 ~ 26197076 (+)

Expression


Co-expression Network