AMCG00021669


Basic Information

Item Value
gene id AMCG00021669
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24382037 ~ 24412448 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021669
aGGTCGAGGGGTCGTCAGCCCTCTGCCTGCGCTCCATGCACGAGCTGCCCGCCCAGCTGCACGACCTGTACCAGCAAGGCTTCGTGCTGACCGCCGTCCACTCCTTCATCCACCCGGCCGgccaggaggagggcagcatgcagcagcggcagcaacagcagctcTACCGGGCTGTTCTCATCAAGCTGGCTGAAAGctcagaaaacaaacagcaaaacaatGATCCCCATAGACTGGAGATGGATATGTGCCTGTCCTCCAACGACTTCCCCGACACCGATGTAATACAGGGCTATATGAAAAAAGTCCAGGACGCTGCGGAACAGGGAGTGACTTTTGTGGGCTTCGTCCAGCAGCACGGCTTTCCGCTGACCTCTGACGCCCAGGAAGACAAAACGCTGTCACTGCACTCCAGCCCGAGCTCTGCGTTCGAGACCTTGGAAGACGGGCCAAGCGTCAACCTAGAGCTGGAGGCTGCAACGGAGGAGGGAGGATGTGGGTCGGGACAGGGGCCGGGGACAGAGCGGGAGACGTCCCCTCCGGCGCTCTTGAACGAGAACGAAGGACAGGCCGACGTCGCGGGCAGTGGGAATAATGGCAGTGAACAAGGGGAGGATTCTTCTCAGCACCCCTCAGATGGACTGACAGACCCACCCACTGACGATGCACAACAACACAAGGACACGGAAGAGGCCCCCGAAACCGACACTCTCACTCACAATAACAACAAGGAGAAGCCGACGGAGGGGGAGCCCAAACTGACCAGCCCAACGCAGTCCAATAAAgTGAAGGTGCCCTTGAGGATCCACAAGAAGGCTGAGAGTGTGAGCAGTCTGGAAGCCAACTGGCTGGATCACATGACCCAGCACTTCACCAACGGTGCCTCCCTAGTGGACGGGTACTTCCATCTTGGACCCGAAAACGATTCTTTGCCCAAGTCGGTTGACGGGGATTTCATCTTTCAAGAGGATGTGGAAGTGGATTCCTCTGCAGTGCAGGCTTATGATGCCATTGTCGTGGAACAGTGGACTGTTTTTGAAGGTTTTGAAGTAAAGACAGACTACATCCCCCTGTTAAAGTCCCTTGCCTCATATGGTTGGAGGCTGACGTGTGTGCTCCCTACTCCAATAGTGAAGACAAACAGCGAAGGCAATCTGGCGACAaagcagattgtttttcttcagagaCCCTTCCTACCCCGAAAGAAGAAGGAATCCAAGAAACTGAGTTTCAAAGCACTGAGAAGTTCCAACAAAAACTCCATCAAAGATGCCccgaaaaacaaaaagaaaaacagcagcgCAAAACTGACACCGAAAGAGTTGGAAGACCAGAAGATTGTAGAAGACGTGGAGAAAGGGGACACAGAGGAGAGTGAGAAAGGCACTGGAAAAGAGGGGAATGAGAGTGGAAACCAGAGGAGTGCAGAGGAGGAGGCTGGAGAGGACGCTGAGCCGCAGGACAAAATGGACACTGAGGATGAGTGGAAGGAAGAGACGGGAGAGAACGAGGAGCCACATGCAGGAACACAGGACAGCGAGATCTGCTGTGAGATGCAGGGAGCTGACGTGAGTGAAGCGTCAGAGCCGGTGCAGGAGACGGCGAGCTCTGACATCCCACAAGACAACAGCAGCTGCCCCGACATCTCACAGGACCTCAGTCTACACATCAGCATTGACTAAGACCGGGCAGCACTGCCGTCTTCACACCATTTACAATGAGGCTTCGGTATTCAGTGAACGGTCCGCTCTCTGCAGCCACCCGCAGTTAGGTTGGAGCGATTTTCAGTGGGTAATTGGCATCTAATTGGCATCCCTGAGGTCATTCATCACCTGTGCTGCATTCCTCACCATTCCTCTACTATATCTGTCTTATAAATCCagaaataaaagatgaaagaaTCTTTGAATTGGTTTTAGTTGTGTTAGTTGGAAAGTGTGCTTCTCTCTGTTTCGTGGAAAAGGGTTGGAACTTTTGGAGTTTTCTTgccatactttttttttttaatgaaaaaatctataatgaatattattttaaatatatatgtatatatatcagcaCAAAAAGTGTTGGTGGCACTTTGTGAAATGATCACAACTTCCAGTGCTTTTGAGTTGTGTATATAGTCAGCATTCCTACTTTTGATCCCAAGATAAATCCATAGAAAGATGGCTTTGGCGTACCCTGCCCATATCCGAGTGTGTGCAACACAGATGTTCGGGTGCAAATAAACAGTACACAGGCTATAGCCTGTGGGTTTTCTTGATCAGGCTGCAGAAAGGATAACACTGATGTTTATGGATATTTAAGCTATTCTCTTAAGTGTATTGTAATCGTAGGTCTGCTTGGAAATGTATGTGTGCCGCTTATTTCAATATTGACGCTGATGGGACCAATTGGAGGCATTTTCAAcattgcacttattttgtaaaGGATCTGCAGAGTAGGCCCCTACCAGGAAATAACAGCAAGACTGTGTTACGGATGATCCCCCGCAGGGCAGACTTTCCAGgatcaaattaaatctaaaaacagCTTGACTAATGATAATGAGCTTGTTGAATTTGTGTGGCAAGTTATAACAAGAATCGTGAATTACTTGAACCTAGAATATTGCtatgtttcatttgaaataatcaaAAGTGACCTTTGACAAGCGTTTATTGATTTTGCAGCTGAGTGCTTAACGTGAGGCAGGAGGGGAATACTCTGGtggcagtagtagtagtgtgttactgtgtgtattttgttgtaaCACTATGGTGAAAGTTATCtctatgtaaatgtattctACCCTGAACAATGTTGAGTGGCGGGCCCACCAGACAGACCTTTGAGTCGGCTGTACGGCATGATCTCAGCACAGGCAGTTCCGATTCCTCAATCGATTGAAAAGCTAGATGTATCTACATTGGATTGGTGTCCATCGGTAGTGGTTCTGAAGATTTGTGTAATAACGTATCTCGTCAAAACCTGCCATGTAAAGTGCTGTACTTTGCATTtccaaacatgaaaaaaaatgtttgtatcaAGGTCTGTTTTAAGACTGGTGATGAAATCCGCttaaagaatatttaaaatctgcGGCTGTTATACTTTAAAGGTATAGGAACAGCATCACCAAAGCTActttttgctcttttttatACTTCTTAACCTATCCATCGAAATATCAGATATTATGGAGTTAAATTCTTTTCACAGAACATATGTTTTAATAGTTGAGTGGTcatgttttaaagtattttatagattttccaCTGTCTCAAACAGGTGGAAATGATTTTATGTACACTATGGTTTGCCAGAGTAAGTAAGTCAAATCAAATAGTTTATAATGGTTTggaccttttttcccctcatttgcTCTCAGAAAATGTATAGGGATTTGGAGAATTCTTCTTATattgtatttctatatatacagagagaaatGCAAAGGATGGAAAAGTGCGGCTCCTCTGAACGGTTGCAAATCACCAGCAACTGAAAGTGATGAGGATTAAAGGATTAAAAATGCTGGGTTTCATTAGAAGATctgaacacacaacaacaactaaCACAATTGAAACAGGGTtttgtttgcctgtgtgtgtgagagtgcatTTTAACATTGAGCTTTGTATCATTGACGACAAAGGCctggtaaatatttaaaaataaaatatgctggAACCATTGTAATTTGCCTTTCTATGAAATGAATTGTGTTGCAATGGAGAACCTATTTACAAAAGTACATATCCCTgttctttcacttttatttaaatggtaGCATCTTTTTGTGCTGATCTTTAGTAGGCCAGTGTTGTCAGGATCCAGCCATAGCCCAGCGATCATGGTTTTGGCTCAGACATAGACTAAATAATGAGTTACTGATTCcaacaactgaaatgccttttttttaGGACgctaaaagtaaaaaaaaatgacaagttCTATCTGCATTAGATTAAGCATCAGATTTCAGTCTTCAGATGTTAATATAGTCTCAAGCAGTGGAATAGCTACTTAACTATTGAGCTATAGGGCGGAGACAGAGGCCTGACGGGTATAGGAACTGTAGTGTAATTTAACTAAGGTGGTCCCCTATTGGCAACAATATCTAGCATTATAACAGAGACCTGTGAAGAGAAGGTGTAATTTTGCCAGCATTGTTGCTGACTCACTTACAACTTTTCCTAGCAAAGCCAGCAATTCAATCCACATACTTTGGTTTCTCCTGCCAGCTTCCCCTGTTGGCTTTGTCATAATTTGGCCAGCAGGTGTGTTCTCCTACACTGGCTCACCAGACCACCGCAGTCTAGGTCATACGCATGACTTGTACTTGTTTGTACGGCACCAATAAGGTCACATCGCGATGCATGTTATTGCAGTAAAGTCGTCTGTGATGTCACCAaagcaaaaactgaaaattCGTGACTGCAGTGCTCACGGTTGAAGGACTAATCGAATGCAGTTGAGTTCCACCCCCATGTTCTCTGGAATGTACCTGGGGCGAGTTGTACTGTAAAATAGGGCACACGCTGTGGTAATAAACTAATGCCGCAGAGGAAATATTCTTGCAACATGCAGTACGCACAGACCTTGCATTTCCACCCCCAGAGTAGTCGCAGTACAAGGCGGACCTCCTCCGCGGCAGGTTTGGCTCAGTAGGCTGGAGCAGAAGTTCAGCGGATATAGTGAAGTGATTGTTTTACCTTTTACCACAGTATTACAGGACGATACAGCAACTGATGCAACCTCCAAGACATTGTAAGGCAGGAGAGATGTGACCTTGGCGCAAATACTGCCTTACATTACGTTTCCAGATGTAAATACACTATAGTCTCTGCACCAGTACCCGGTCACGACGACACAGGCACCAGCTTCACTGTGATTCATAAAAGCGTGGGTCCACATCACCTTGAGTCAATAAGGGAAGCGCTGAGTCTCAAAATAATCATGGGACGAGGCATCCCTTAATCCTTTTTATACAGTGTTTACTCCGAGGAGCAATGCAGAGCCTCGGTGTAAAGCAGTTTCTGCAGTATGATTGTGTAGTTTGATACTGACTGTTGTTTGGACCACCTTGTCTGAAAGGCAGGTGGTACTCCTTTAAACTGCTTCCTGCATCTGTGTGTAGTCTACAGTGTTTAGAAATGAGCAGTAATGCCAGTTTCATAGTTTAAAATTacttacagaaaacatttgttgtTAAATGCTCCTTTCCACAGTATGTACTAATGTttgtgaaaaatgcatttgtaagtgTTGGCACAATTGAAGTAAGTCTTAAAACGCTTCAGCTATCTGTAATCTATGCTGTAATAGGCTTTTTCGTGGCTTTTTGAGCATAGAATTGCTTTTGGAGTAAAGTGTATTTCAGCCAACCTCCTCTACATTGTTTTCACTACTGCAAGCAATCACATCTTGTATGtaagctttaaaatatgttgtttgtcAGTGTTGTGGACATAGGACGGAACGGTGCACTGCTCTGGGTAAAGAAATTGTTTTTTCACTGTTTCAATCTGGTACACTCGGAACACTGTGTGCTTGCCATGCATTCTGTAAAAAAACGTGTATATTACAGATCtgctttatatttgattttcattttgtttttaatatgaatatatttggTTTTGTAAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021669 True 5638 mRNA 0.44 8 24382037 24412448

Neighbor

gene id symbol gene type direction distance location
AMCG00021667 NA coding downstream 12914 24366725 ~ 24369123 (-)
AMCG00021666 ankrd28 coding downstream 74966 24279592 ~ 24307071 (-)
AMCG00021663 NA coding downstream 104441 24261901 ~ 24277596 (-)
AMCG00021661 NA coding downstream 125414 24237275 ~ 24256623 (-)
AMCG00021660 fkbp14,LOC106943903 coding downstream 161359 24215868 ~ 24220678 (-)
AMCG00021670 NA coding upstream 23759 24436207 ~ 24445238 (-)
AMCG00021673 NA coding upstream 140569 24553017 ~ 24568180 (-)
AMCG00021674 NA coding upstream 182449 24594897 ~ 24609459 (-)
AMCG00021675 LOC107716986 coding upstream 354337 24766785 ~ 24802333 (-)
AMCG00021677 NA coding upstream 562820 24975268 ~ 24986960 (-)
G87495 NA non-coding downstream 102650 24278637 ~ 24279387 (-)
G87428 LOC103376870 non-coding downstream 248726 24080736 ~ 24133311 (-)
G87427 NA non-coding downstream 304930 24076899 ~ 24077107 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 893825 23482972 ~ 23488212 (-)
G87282 NA non-coding downstream 900137 23433216 ~ 23481900 (-)
G87573 NA non-coding upstream 133634 24546082 ~ 24548123 (-)
G87627 NA non-coding upstream 574994 24987442 ~ 24989739 (-)
G87622 NA non-coding upstream 575953 24988401 ~ 24994242 (-)
G87694 rpl15 non-coding upstream 999956 25412404 ~ 25460562 (-)
G87707 NA non-coding upstream 1119025 25531473 ~ 25531759 (-)
AMCG00021668 NA other downstream 18578 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 171832 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 883276 23495025 ~ 23498761 (-)
G87263 NA other downstream 1043553 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 1049069 23329325 ~ 23332968 (-)
G87674 NA other upstream 991202 25403650 ~ 25406538 (-)
G87806 NA other upstream 1492996 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 1678779 26091227 ~ 26105391 (-)
G87871 NA other upstream 1739657 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 2261630 26674078 ~ 26718508 (-)

Expression


Co-expression Network