AMCG00021670



Basic Information


Item Value
gene id AMCG00021670
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 24436207 ~ 24445238 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00021670
GCCGACCCTCCCCCCGGCTGAGTTTATTTAGTGTCAAAAACGCCGGCGCCGGCACTGCGGATGAGGGCGGCAAGTTAAGAGTTCAGCAGTTGGCGGCCAGGGGGAAAATATCgagattttgttttatgcctGGGAGAAAGTGATTCATTTGTGGTGcagttttaatggttttatttgaaaatgGAGATACAGAAACCGGTTGCAGCGAGAAATGGATGCCCGTCTTCCCCTTCATTGAAAATGGCGAATGGGTACATCTTGCCCGAAGGAAAAGTAACCCCAAATACCCTTTTTGTGGGTGGGATTGATATGAAGgtggatgaaaatgaaatcaggGATTTTTTTGCAAGGTATGGTGCTGTGAAGGAAGTCAAAATAATCACTTATCGCGGGGGCATATGCAAGGGGTACGGCTTTGTTTCGTTTGAGGACGATGTGGACATTCAGACCATTGTTGAGcaacAGATCAGTTTTAAAGGCAGGAGACTGAAGCTCGGACCAGCGATCATGAAAGAACGGAGCTCACGTTCTGTTCAGGGTCACGTCGGCGGTCCGCCACACTGGATCAGCCCGTCACAATATGTGTATTGTAGCTGCTGCACCCAAGTGATGGGCAACGTGATGCAGCCTTCTACAGCTATGAATGCAGCAAGCCAGTACATCCAGCCGTACTCTTATTCTGGTGTGCCAGGAGTTATGATGCCACAGATGCCTCTGAGCTATTCCCAGACTGCCTACGCATATCAGTATGCTGCTCCACACTGGTCTGGGGAGCAAAGGACAAGACTCGTGAATCAGAACTTCGTCGACTGTGGCGTACAGACACTGATGACCCTCTTATAGTTTCCTTCCACTTGAGAAAAAGCTTTTCCAAGGTATAAAGTGGGCACTCTACAAGCGCTGAGATGTTATCCAAATACAGATTGGCAAAGCATGTGGGCTTTTATTGAACTTTTCAAGATGCTCtcttaacattttaattcagattacCCCTCACAAGAAAAATGAAGCGCTTACTTAACAGCGTAATAACGGCGGCATTCTTGAAAAAGCTTCACTGAATCAGAGATTGACTAATAAGTTTTAGTTCAGTTGAAACATTTTTAGCATCTTTGCTGTTGGAGGAAAAAATGGAAGATGtcactattttttttgttcttcccactgggtttttgttattttccatttttgctgtttttttttttttttttcctctagtCTGatccaaatatttgttttaattcacctgtccttatttatattttactttttttgtcaATTCTTTCCCTAGACTGAGTGATTTCTAATGCTTTCagttaatatgtatatattgagcTAGGAGTATCGTTACTTAAGTTTAATGCCATGTAACGGCTGGAGTTATTGATTGTTCAGAACCTGGagttattttttactttgagtTACTTAAGTGACTCAATGATGTGCCTTTTCACCGATTTATGTATAAACTCTAATTTAAACATCTTGAGACTTAAATATCTGGCCTCGGagggatatttattttaagttggtGCGATAAGAAACCATAGATTTTTCTGGGTACCTAGTAAATTACTTTccacatttctattttaatttctctcacCGAATTAGATTTATTGAAAGTAAAGCACTTCTATATCTTTATTTGTTGTAGTAGATTTCAGAACTTTCCTATGTACACTGTCCCTTAAATGTTCACTGTGTGCCATGTTCAAATTTCTGTAGTTTAATGTGCACTTCTTTTGAAAAATTGCATCTTGGGTACCAATTATGAGCTATGTACCCAAGATAAATCATAGCATCAGTTTCactgaatgcatttgaaatgttggATTGCTTCACTGCATAAAACCTATTAAGTGATTCTAGGCCTTGTATAGTTTTTAATACCATGGTAATGAAGGAGAAAATTAGGGGGGGGTCTTAAAATTCATTATTGGTTTTATGCACCATTTGTCAGCTGTTAAATTTGTTTTGACTTACTATTGTAGTTTCACTTACAgatgtttcatttttgtaaagttCAAGTTGAAAATGTTCAACTGgtgttttgcatgtttaaatttaactttttggTGTTTGAAGTTCTTTGGGAAAACATTTCTACCTTCAGGTTTCCAGGTTCTGGTTTACTATGACTTAATTATTTAAGCTTcataagatttgttttaatctaaacAATGTTTACTACTTGATTTTTCTTAAGTACCAAAAACAATGTGTGATGTAAgagttgtattttaaaaggcaaatacTCATCGGTTCTATCTAGTTATCTACTGATAGCCATTAAGTTACAAATGTCATGAAACAAgatgtttgcagttacaaaatAGGAATTTTATGACAAACATGAAAAGCTTGAAGCACTTGCTAAGAACTAATGGTTTTTCTGTGAATTATGgccttttaaaataacttcagATTCCATTTTCTCATGGGACTGACAAGGATGAAGAGAATTTTGGTAAATGGGTTTTTGTTATTTCCTCCTTTGCTACTAATGGTGACTGAAGCATTAGTACAACTCGCTTGAATGTCTGaggtaattgttttgttaagtttcttttcttttttctttccccacacaagaaatgttatgttttgttaaagtttaaataaaagtttaaattattttgcaaaa

Function


GO: NA

KEGG:

id description
K24980 DAZ; deleted in azoospermia protein

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00021670 True 2647 mRNA 0.37 10 24436207 24445238

Neighbor


gene id symbol gene type direction distance location
AMCG00021669 NA coding downstream 23759 24382037 ~ 24412448 (-)
AMCG00021667 NA coding downstream 67084 24366725 ~ 24369123 (-)
AMCG00021666 ankrd28 coding downstream 129136 24279592 ~ 24307071 (-)
AMCG00021663 NA coding downstream 158611 24261901 ~ 24277596 (-)
AMCG00021661 NA coding downstream 179584 24237275 ~ 24256623 (-)
AMCG00021673 NA coding upstream 107779 24553017 ~ 24568180 (-)
AMCG00021674 NA coding upstream 149659 24594897 ~ 24609459 (-)
AMCG00021675 LOC107716986 coding upstream 321547 24766785 ~ 24802333 (-)
AMCG00021677 NA coding upstream 530030 24975268 ~ 24986960 (-)
AMCG00021679 NA coding upstream 562452 25007690 ~ 25012760 (-)
G87495 NA non-coding downstream 156820 24278637 ~ 24279387 (-)
G87428 LOC103376870 non-coding downstream 302896 24080736 ~ 24133311 (-)
G87427 NA non-coding downstream 359100 24076899 ~ 24077107 (-)
G87287 cbx3,LOC108425284,LOC105023664 non-coding downstream 947995 23482972 ~ 23488212 (-)
G87282 NA non-coding downstream 954307 23433216 ~ 23481900 (-)
G87573 NA non-coding upstream 100844 24546082 ~ 24548123 (-)
G87627 NA non-coding upstream 542204 24987442 ~ 24989739 (-)
G87622 NA non-coding upstream 543163 24988401 ~ 24994242 (-)
G87694 rpl15 non-coding upstream 967166 25412404 ~ 25460562 (-)
G87707 NA non-coding upstream 1086235 25531473 ~ 25531759 (-)
AMCG00021668 NA other downstream 72748 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 226002 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 937446 23495025 ~ 23498761 (-)
G87263 NA other downstream 1097723 23338251 ~ 23338484 (-)
AMCG00021630 NA other downstream 1103239 23329325 ~ 23332968 (-)
G87674 NA other upstream 958412 25403650 ~ 25406538 (-)
G87806 NA other upstream 1460206 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 1645989 26091227 ~ 26105391 (-)
G87871 NA other upstream 1706867 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 2228840 26674078 ~ 26718508 (-)

Expression



Co-expression Network