AMCG00021696


Basic Information

Item Value
gene id AMCG00021696
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25719357 ~ 25799664 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021696
ATGGATGATAATGCCTGCAACCTTACCATGCCCGATCAAGACAAAAAGTTAAAGCGAACAGGTAGAGCACCACAGAAGAAGACAAAAGGAGTCACTGACAAGGAAGTTTCTGATCTCAGAAGACTATTGTCCCTGCTCAATGCCCCAGCAGGAAAATCTCAGTTGCAAGCTGTGAGTTTCAATAAAGCACGCAGCAGTGTCATAAAATCACAGCATCACCCTCCCCAACAAAAGTGCAATGACAGCAATACCAGGAGTTCACAATCCCAATCTGACGAGGCCGTGGAACTGGAGAATTTCAGTGTGAATTACAAGAACGAAAGGAACTTTAGCAGCCACCCACAGCAAAAACTGTTTCTAGACATCTTCACGGTTCTGGTCAAGAACAGGTTCACCTGCAGTGAGTGGGCTGGCCAGGCCCAACCTGATAACTTCCTGCGGGTGTTGATATGTCTGCGCTTACTGATGAGAGAGCTGCTCTACCAGTACATGGAGTCAATTTCAACTTGCTATCTTGAATATGGAGAAGAGCCATTTGTAATGGAAAAGCTGGTCAACATGACTTGTAAGATTTTTctcattACTTTAGTGAAACTTCTTGCAGCCAGAGACAACAGTGTTCTGCTGGGCGCTCTCCTGGCACTAACTAGCTTAGCAGACAGCCCAGTTTATAGAGAGAAGATCGGAGAGCTCAGCATTGTGGAAAACCTCTTGATGATATTGCAGGAATACGACCTGCTTTCGAAAAGGATGGCGGCAGAGGTGCTGCGTCTGCTGTGTGCTGAGCAGTGGGTCAGGGAGCAGGTGAAGGTCTATGAGGGGATTCCCATTTTGCTCAGTCTGCTGCACTCGGAGCACCTCAAGCTGCTGTGGAACGTGGTGTGGATCCTGGTGCAGCTGTGCGAGGATCCCGAGACCAGCGCCGAGATCAGGGTTGACAGAGATTTTGTGTCTGATCGTTCCTCTGTCGGGAGTTTGTCCAGTGCCAACGCTGCTGGCAGGATTCGGCAGCAGCATGTATCTGAAGAGCTGAGTCCTCTGGAAATACTAGAAAACACATTGTCGCTGCAGGCTGCCTGCTGTGCTGCTCTGACAGAGCTTGTATTGGATGACACTAATGCACACCAAGTAATTCAgGAAAATGGGGTCTACATAATAGGGAAATTAGTTCTGCCACATAAGCAAAAGACTGGACCAAAGGCGGAAATGCTTCAGTGCTACGCCTTTAGGGCTTTGCGTTTCCTGTTTAGTATGGAACGAAACCGGCATCTCTTCAAGAGAGTATTTTCGACAGAATTGTTTGAGATGTTTATTGACATTGGCCATTATGTTCGTGACATCACTGCCTATGAAAAGCTGCTAGCAAAAGTCTCCACTCTTTCAGATGAAGAATTAAATACTATCAAAGAAAGTATTGAAACTGCAAATCAGAATAAAGCTCCATCGAAAGTAATCAATGGTTATGCCATTCTCGACCATCTTGGGAGTGGAGCGTTTGGGAGCGTTTATAAGGTGAGGAAACAGAGTGGCCAGAATCTGTTTGCCTTGAAAGAAGTTAATCTCCATAATCCTGCCTTTGGCAAAGACAAGAAGGACCGGGACAGTAGTGTGGAGAAGATTGTGTCAGAACTCACCATCATCAAAGAGCAGATGAACCATGTTAACGTTGTCAGATATTACAAGACCTTCTTAGAAAGTGACAGACTGTATATTGTGATGGAGTTGATTGAAGGAGCGCCCCTTGGTGAACACTTCAATTCTCtcaaggaaaaacaacagcGCTTCACAGAAGATAGGATATGGACTATATTTATTCAGATGTGCTTAGCCCTTCGATACTTGCATAAAGAGAAGAGGATAGTGCATAGAGATCTCACTCCAAACAACATAATGCTGGGTGAAAAGGATAAAGTAACCATAAGTAATCCTGAGATTGTGAAAAGCGAGCCGTATGGGGAGAAGGCTGATGTGTGGGCCGCCGGCTGCATTCTGTATCAGATGGTCACTCTCAGCCCGCCCTTCTACAGTACAAACATGCTCTCTCTGGCCACCAAAATAGTAGAGGCTGTTTATGAGCCAGTTCCAGAGGATGCGGAGATACGGCCAGACATTGTGGAGGTCAGTGCCAAGATCTCAGACATCATGATGAAGTACGTGGATGCCCTCCGTAGCTCCCAGCTCACCCTGGAGAAGAAACTCGACCGGGAGAGGAGACGCACACAGAAGTACTTCCTGGAAGCCAACAGGAGCATGCTGAGTTACTGTCAGGCAGCACCTGCATTAGCCAAGGTAAAAATAGAGAAGTGGGATATTGGATCTGATGAAGACCTGGATACATCTGATACCTCCAGCAGTTCCACTTCAAGCCCAACATCTGCAGGAATCGCTGTGTCACAAAGGAAAGTTCGCCAGATCAGTGATCCTATCCAGAGAATACTTATTCAGTTGCACAAAATTATCTACATTACCCAGcttCCTCCTGCTTTGCACCACAACTTCAAAAGAAGAGCAATAGAGAGATTCAAAAAGTCACTATTCCACCCTCTGAGTAGTCCTTATAActtgaaaacagaaatgaaaaagCTTCTGCAGGGCTGTCCAGAGCTCATAGAGCCCAGCTCCATTAGTATAGACAGTCGTTTCTTATGCCAGTCCTTTGGGGGAAACCTACATGTTCCCGAGGATCAAGGTAGTACAGGAAATGTGAACTATCAGGATGGCATTACATACGAACAGATGCAGACCATGGTGGAGGAGGTTCTGGAGGAAAACGGATACTACAGAGCAGCGTCAAATAGGTGTCACAGCAGTTTAAATTACTCCATATCGCTGAAACCCCAGACAAGACAGGTCCAGCATCTGCAGGCTCTCCTCCACCCCTTTGAAAGCCTGCTCGCCCACAGACCCAATCACGTTCCTGGAGAGGTTGAGCTCCCTGAGCTGGTGCAAGTCCTTAAAGATGCCATCAGGGATAGACGTTATCTGATTGGAGTCCAGGCTGAGCAGGGTGGTGTCATCCTGAGGCGGTGGGTAACTGTATCCTCTGAAACGCCAAGAAGAGTGagtaagaaagagagagagggagaagggaggaGTCCGGCTGTGCTTCTCCGGGAAGGTGTCAAAGGAGGAGGAGCACACCACTCTCCCTACAGTGTCAGCATTCCAGGAACCAGGCAGGAGCTGACCTTTGGAATTCGACCTTTCTCTATCAAAGAGCACACCATGGCTGTGGATCCGAGACATCTGAGTCGAGCTGCCCCCAGTGAGTCTAAAAGGCTGGGCAGAATCAGTGCCTGGCCCAGTGACCTGacaatacatagTCTCTGCAACAGACAGTGCCCTTGCTTAATCATCATATCTTCTAAAGTCGCGGGCATTGAGcagcattgtgaaattgtgctTGGCAGTGGGCTCTGGAGCACTTTGAAATTCACAACAAAGCCTgcaaattaa

Function

GO: NA

KEGG:

id description
K20879 NEK10; NIMA (never in mitosis gene a)-related kinase 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021696 True 3456 mRNA 0.47 37 25719357 25799664

Neighbor

gene id symbol gene type direction distance location
AMCG00021690 NA coding downstream 5591 25705576 ~ 25713766 (-)
AMCG00021691 top2b,LOC106570304 coding downstream 14529 25682770 ~ 25704828 (-)
AMCG00021686 nkiras1,LOC106588667 coding downstream 307795 25406702 ~ 25411562 (-)
AMCG00021681 NA coding downstream 515456 25202404 ~ 25203901 (-)
AMCG00021680 LOC104951919 coding downstream 634275 25074347 ~ 25085082 (-)
AMCG00021695 NA coding upstream 74227 25873891 ~ 25884232 (-)
AMCG00021699 elmo1,LOC107710279,LOC107556397 coding upstream 163250 25962914 ~ 25976336 (-)
AMCG00021698 elmo1,LOC106570440,LOC106515744,LOC107702083 coding upstream 225734 26025398 ~ 26056857 (-)
AMCG00021701 NA coding upstream 284114 26083778 ~ 26089986 (-)
AMCG00021710 NA coding upstream 640991 26440655 ~ 26472215 (-)
G87720 NA non-coding downstream 38337 25678187 ~ 25681020 (-)
G87719 NA non-coding downstream 41940 25676983 ~ 25677417 (-)
G87717 NA non-coding downstream 61564 25657382 ~ 25657793 (-)
G87707 NA non-coding downstream 187598 25531473 ~ 25531759 (-)
G87694 rpl15 non-coding downstream 258795 25412404 ~ 25460562 (-)
G87767 NA non-coding upstream 3676 25803340 ~ 25809204 (-)
G87800 NA non-coding upstream 85670 25885334 ~ 25885977 (-)
G87803 NA non-coding upstream 97294 25896958 ~ 25898041 (-)
G87882 NA non-coding upstream 595287 26394951 ~ 26395179 (-)
G87883 gabbr2 non-coding upstream 619016 26418680 ~ 26418899 (-)
G87674 NA other downstream 312819 25403650 ~ 25406538 (-)
AMCG00021668 NA other downstream 1355898 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 1509152 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 2220596 23495025 ~ 23498761 (-)
G87263 NA other downstream 2380873 23338251 ~ 23338484 (-)
G87806 NA other upstream 105780 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 291563 26091227 ~ 26105391 (-)
G87871 NA other upstream 352441 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 874414 26674078 ~ 26718508 (-)
AMCG00021723 hsf1 other upstream 1100299 26899963 ~ 26919844 (-)

Expression


Co-expression Network