AMCG00021709


Basic Information

Item Value
gene id AMCG00021709
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 26564206 ~ 26566938 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021709
GTGATTTTCAGACGACTTCCTCATCATAGCCGATGtgtaccaaaaaagaaaacgtaAAGGCACATTTTTGAATTCTAAAGgaatatttcttacattttctccTGATGTTACAATTGGAGAAAAAGTAGTGGCTTTTGAGATGAAGTCCTAATTTCGAAGTTCTTAATGAAGGCAGCCAAATGGATTGACAGGTTTTGAACCAGGAGTGTTGTGAGAACCATTTGCAGTTCGTTCCAATCCTATTTAAATGACAGTTACTCATTGGGTTGGCTGATTTGTACATGAAGTTTCAAGGGTTAATCTTTTGTCACATTTGATACAGTTCATGGAATATAGAGCACATTTAGCAACTATCCTGCATTGGAGAAAACCGAAGAAATCTGGATACAAAAGTCACAGAACGATGGTATACAAAAATGTCAAGCTGCCTGCAGCAATTCCTTCCAGTGAGAAATGATCTTTGGCTGCCTTTCTGTGTGACTTTGGAGTGaatttgtaaatacttctgaatGGCCAATGaggattaatttgttttaatccttGTTGTATGTACACTGGGTTTTTCCACATGTACTGGAAGGGTGTGTTTATCAATTTGTCAGGTCTGGCTTGGATGTAAAGGTAGACTGGTGACAGTCAATGTGCTTCAGAACAGGGAACACCCCAAAACATGCTGTTTTTATCAGTTGTTTGTATAACCCACTATATGTCTTTCACAGAATCTGTGTCATCACACTGGCAGAATCGCACCCAATTGTACAACAAGGCAAAAAAATCAAGAGCATCAATTACCAGATCAGTGCCAACTGCAGCCGGCTCCAGAACAAGGTTTCTGGGAAATCCAAGAGGGGTGGCCAGTTTCTCACTGAGTTTGCACCTCTGTGCAGAATAATGTGTGCAGATGGGGAGGAATATACGATTTGTAGCTGTATTAGAGGACGCCTCTTGGAAGTAAATGAAGATCTTATCACAAATTCTGATCTCTTACTGgaaaagCCGTCCACAGAGGGCTACATCGCAGTTGTGCTGCCTAAATTTGAAGAAAGTAAGAGTGTAACCCAGGGACTCTTGACCCGGACAGAGTACGAAGATATCGTTTCGAAAAGACAGAGCAGCACTCCAGAGCCATGCTGACCGCAACGTGTAGCTTTGTGTAGCAACTTGTCTGCTTATCTGTTCAAGCTGGGGGCTTATACTGCGACATGAGGGCTGTCAGGAACACATTTCTGCAGTTTTCAGATACAGCCGAGGCATTAAGAGCTCTCCATCCCTAGTAGGCTTAAGGGAACACCATGTGAAGAAACGGAAATAAGGAGAATAGTTATCAGTGTAGAGTTGgttttttgaaaaatgcataactttttataattattttgaaaagcagttgaaagaaaataatgtttggatgtattgttttcaaataaaaccataacagTGAGGTTAAGGAGTAAAGAATtaagatttttatttgaaaaatataaatttgacaTGTTAATTATTA

Function

GO:

id name namespace
GO:0006546 glycine catabolic process biological_process
GO:0005960 glycine cleavage complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021709 True 1501 mRNA 0.39 4 26564206 26566938

Neighbor

gene id symbol gene type direction distance location
AMCG00021710 NA coding downstream 91991 26440655 ~ 26472215 (-)
AMCG00021701 NA coding downstream 474220 26083778 ~ 26089986 (-)
AMCG00021698 elmo1,LOC106570440,LOC106515744,LOC107702083 coding downstream 507349 26025398 ~ 26056857 (-)
AMCG00021699 elmo1,LOC107710279,LOC107556397 coding downstream 587870 25962914 ~ 25976336 (-)
AMCG00021695 NA coding downstream 679974 25873891 ~ 25884232 (-)
AMCG00021716 NA coding upstream 76816 26643754 ~ 26656084 (-)
AMCG00021724 csk21,LOC105902032,LOC105022821,LOC107589440,LOC107693292,LOC107559708,LOC105910791,LOC107670008 coding upstream 238102 26805040 ~ 26824298 (-)
AMCG00021725 NA coding upstream 379234 26946172 ~ 26946690 (-)
AMCG00021731 brp16,LOC107589436 coding upstream 437543 27004481 ~ 27009904 (-)
AMCG00021732 NA coding upstream 487105 27054043 ~ 27064071 (-)
G87884 NA non-coding downstream 126313 26432144 ~ 26437893 (-)
G87883 gabbr2 non-coding downstream 145307 26418680 ~ 26418899 (-)
G87882 NA non-coding downstream 169027 26394951 ~ 26395179 (-)
G87803 NA non-coding downstream 666165 25896958 ~ 25898041 (-)
G87800 NA non-coding downstream 678229 25885334 ~ 25885977 (-)
G87980 NA non-coding upstream 231153 26798091 ~ 26800715 (-)
G87992 NA non-coding upstream 325538 26892476 ~ 26895336 (-)
G88095 NA non-coding upstream 842485 27409423 ~ 27409711 (-)
G88153 NA non-coding upstream 1052882 27619820 ~ 27620091 (-)
G88154 NA non-coding upstream 1060182 27627120 ~ 27631668 (-)
G87871 NA other downstream 409831 26152105 ~ 26154375 (-)
AMCG00021700 NA other downstream 458815 26091227 ~ 26105391 (-)
G87806 NA other downstream 656201 25905444 ~ 25908005 (-)
G87674 NA other downstream 1157668 25403650 ~ 25406538 (-)
AMCG00021668 NA other downstream 2200747 24342900 ~ 24363459 (-)
AMCG00021719 ndrg1a other upstream 107140 26674078 ~ 26718508 (-)
AMCG00021723 hsf1 other upstream 333025 26899963 ~ 26919844 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other upstream 2214864 28781802 ~ 28783281 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other upstream 2502263 29069201 ~ 29071760 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 3163139 29730077 ~ 29742808 (-)

Expression


Co-expression Network