AMCG00021721


Basic Information

Item Value
gene id AMCG00021721
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 26836840 ~ 26844877 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021721
gaaaaatataatgtgagaAACAAAACTGGTAACAAAAGGTTGTCTGTGAAGTTTGCCTGTACCCCCGGGGATAAGAGAGAttccatttacaaaatgtacgTAGGAGACACAAGAATCCTTACATTAAGCATGCAATTAATGTAATCcaagatagtttttttttttttaatcagcacAGCCACAGAAGTAGCCCAACCCCCTTGTAGTTCATGATATTTGAAAAGGTATAAAAGCCACAGTAGCTACCTATACTTTGAAAACCACTTGAAGTATAGTTTTCAGAACTGCTGTACTGTATAACCCAGGATTCATATCACTAAGCTGCAAATATGCTGTGCAGGAATATTCTGATCGTTCTATCCTTGGCAATTCTTCTCGTAAATGCTGAACCTGATTTAGatggGGGCTCTCAAAACTCCCAAGCCATGTCCACAGacaaGCAGTACTATCTCAATGGATGGACCGGAGATGGCATCAATTCCAGCATTGAGGATCAGGATGACGACCAGAACTCCAGCTCTGATGAAAAAGGAAAGCACTAAACCAACCTTCAGAGATCTGCGATTTACTAAGATTAACGACCTTGACTGCTATGGTTATGGAAGATTAGGCACAAGTGCTAGTTTCTCCAGTCTTAGCCTCTAGGAACAAATGGATTTAAAATCTGACTGTGTCAAAAGTCACTGTTGAAATCAAAAGTAttcttttgcttgttttttatgATTATCTTGTTATGCCAATagatttttacctttttaaataacatctgaaatggtggaaaaggaaaacaaaatctcacatgatttcttaattttttttaaaataaacttctcTGAGCAAACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021721 True 845 mRNA 0.37 7 26836840 26844877

Neighbor

gene id symbol gene type direction distance location
AMCG00021720 ptp4a3,LOC103029087,LOC108436585,LOC107587801,LOC107714615,LOC107552859,LOC107704902,LOC107724783 coding upstream 33855 26784119 ~ 26802985 (+)
AMCG00021718 NA coding upstream 85252 26750431 ~ 26751588 (+)
AMCG00021717 NA coding upstream 136599 26687100 ~ 26700241 (+)
AMCG00021711 NA coding upstream 156755 26661019 ~ 26680085 (+)
AMCG00021715 NA coding upstream 193519 26640291 ~ 26643321 (+)
AMCG00021722 NA coding downstream 5001 26849878 ~ 26865877 (+)
AMCG00021726 bop1,LOC107693294,LOC107753474,LOC107669991 coding downstream 109280 26954157 ~ 26978899 (+)
AMCG00021729 NA coding downstream 156240 27001117 ~ 27002570 (+)
AMCG00021730 NA coding downstream 165992 27010869 ~ 27011910 (+)
AMCG00021728 LOC102788509,LOC106570431,LOC106588958 coding downstream 167045 27011922 ~ 27024907 (+)
G87962 csk21,LOC107734013,LOC108425256,LOC105910791,LOC105902032,LOC105022821,LOC108267736 non-coding upstream 19558 26813030 ~ 26817282 (+)
G87961 NA non-coding upstream 25973 26808257 ~ 26810867 (+)
G87942 NA non-coding upstream 98957 26720909 ~ 26737883 (+)
G87939 NA non-coding upstream 123364 26710217 ~ 26713476 (+)
G87824 NA non-coding upstream 742644 26091176 ~ 26094196 (+)
G87993 NA non-coding downstream 51848 26896725 ~ 26906365 (+)
G88024 NA non-coding downstream 212497 27057374 ~ 27057611 (+)
G88025 NA non-coding downstream 215305 27060182 ~ 27060389 (+)
G88026 NA non-coding downstream 216942 27061819 ~ 27062090 (+)
G88027 NA non-coding downstream 218686 27063563 ~ 27063951 (+)
AMCG00021707 NA other upstream 267692 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 639764 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 966645 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 1083587 25752357 ~ 25753253 (+)
AMCG00021682 NA other upstream 1464501 25276776 ~ 25372339 (+)
AMCG00021745 NA other downstream 788038 27632915 ~ 27637084 (+)
G88238 NA other downstream 1933438 28778315 ~ 28778733 (+)
G88276 NA other downstream 2216010 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 2419950 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 2533698 29378575 ~ 29385325 (+)

Expression


Co-expression Network