AMCG00021725


Basic Information

Item Value
gene id AMCG00021725
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 26946172 ~ 26946690 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021725
ATGGTGCGCTCAGCCCCCAGCAGGTTTCTGTACTCTGAGATCAGCATGCTGTCAGAGGACGAGGAGAACGGTAGTGAGAGCTCGGGTTCGGACGAGAAGTCCTTCCACCTGGATGGCTCCGGCTATGAAATCAAGGTGGGCAGCAAACGGAAATCCGGCAGTCGGCGACCTCCGCAGATCGTGGGCGAGACGAGGCAGAGGAACGCAGCCAACGCTCGTGAACGGGACCGGACCAACAGCGTCAACACAGCTTTCACCGCACTCCGGACGCTTATCCCTACCGAACCTGCCGACAGGAAGCTGTCCAAGATTGAAACCCTGCGCCTGGCGTCCAGCTACATCTCTCACCTGGGCAACGTTCTGCTAGTGGGGGAGTCCTGTGGGGATGGGCAGCCCTGCCACACGACTTCCTCCTACTACCACCACAGCAGCCCAGGAAGGGACACTGAGAACTCCCAGCCCAAACAGATCTGCACTTTCTGCCTCAGCAACCAGAGAAAACTGGTGAGTACTGTATGA

Function

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021725 True 519 mRNA 0.59 1 26946172 26946690

Neighbor

gene id symbol gene type direction distance location
AMCG00021724 csk21,LOC105902032,LOC105022821,LOC107589440,LOC107693292,LOC107559708,LOC105910791,LOC107670008 coding downstream 121874 26805040 ~ 26824298 (-)
AMCG00021716 NA coding downstream 290088 26643754 ~ 26656084 (-)
AMCG00021709 NA coding downstream 379234 26564206 ~ 26566938 (-)
AMCG00021710 NA coding downstream 473957 26440655 ~ 26472215 (-)
AMCG00021701 NA coding downstream 856186 26083778 ~ 26089986 (-)
AMCG00021731 brp16,LOC107589436 coding upstream 57791 27004481 ~ 27009904 (-)
AMCG00021732 NA coding upstream 107353 27054043 ~ 27064071 (-)
AMCG00021736 NA coding upstream 249402 27196092 ~ 27202305 (-)
AMCG00021735 LOC105904932,LOC108429636 coding upstream 289884 27236574 ~ 27261351 (-)
AMCG00021738 cfap20 coding upstream 340562 27287252 ~ 27291996 (-)
G87992 NA non-coding downstream 50836 26892476 ~ 26895336 (-)
G87980 NA non-coding downstream 145457 26798091 ~ 26800715 (-)
G87884 NA non-coding downstream 508279 26432144 ~ 26437893 (-)
G87883 gabbr2 non-coding downstream 527273 26418680 ~ 26418899 (-)
G87882 NA non-coding downstream 550993 26394951 ~ 26395179 (-)
G88095 NA non-coding upstream 462733 27409423 ~ 27409711 (-)
G88153 NA non-coding upstream 673130 27619820 ~ 27620091 (-)
G88154 NA non-coding upstream 680430 27627120 ~ 27631668 (-)
G88157 NA non-coding upstream 688214 27634904 ~ 27636720 (-)
G88190 NA non-coding upstream 1156640 28103330 ~ 28103666 (-)
AMCG00021723 hsf1 other downstream 26328 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 227664 26674078 ~ 26718508 (-)
G87871 NA other downstream 791797 26152105 ~ 26154375 (-)
AMCG00021700 NA other downstream 840781 26091227 ~ 26105391 (-)
G87806 NA other downstream 1038167 25905444 ~ 25908005 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other upstream 1835112 28781802 ~ 28783281 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other upstream 2122511 29069201 ~ 29071760 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 2783387 29730077 ~ 29742808 (-)
G88527 NA other upstream 3390893 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 3931158 30877848 ~ 30888588 (-)

Expression


Co-expression Network